Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0078 ATGCATCTGGAGATCATCAGCCAGGGAGTTCCTCCAACTACACTACGAGAAATCTCCCTCCTTAAGATGCTTTACCAGTCCATCTACATCGTCCACTTGCTCTCTGTTGAGTTCATCCACAATACTTCAAATCTCTTCCTGGTCTTTGAGTACCTTGACACTGATCTTAAGAAGTACATGGATTCTCTCTGGCAAGATCCCATATATGGGTTTCTTTCTCCTTCCTGTATTCAGAGCTTCCTTTACCAGCTCTGCAGCGGTGTTGTTCACTGTCACAACCATGGTGTTCCGAATCGTGGACCCAATATCGGGGGCATTGATATAATTCTACTTAGATGTAGTCGACATAAAATGCTAGAGTATAACCCAGCTGAGAGAATCTCCGCCAAAGCAGCACTTGATCATCCCTACTTTGACAGCCTTGACAAGTCTCAATTCTAG 441 0.4444 MHLEIISQGVPPTTLREISLLKMLYQSIYIVHLLSVEFIHNTSNLFLVFEYLDTDLKKYMDSLWQDPIYGFLSPSCIQSFLYQLCSGVVHCHNHGVPNRGPNIGGIDIILLRCSRHKMLEYNPAERISAKAALDHPYFDSLDKSQF 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0078 146 SMART serkin_6 1 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0078 146 Gene3D Transferase(Phosphotransferase) domain 1 52 96 - -
Lele11g0078 146 SUPERFAMILY Protein kinase-like (PK-like) 116 141 IPR011009 -
Lele11g0078 146 SUPERFAMILY Protein kinase-like (PK-like) 14 96 IPR011009 -
Lele11g0078 146 PANTHER CELL DIVISION PROTEIN KINASE 8 97 - -
Lele11g0078 146 Gene3D Transferase(Phosphotransferase) domain 1 107 146 - -
Lele11g0078 146 ProSiteProfiles Protein kinase domain profile. 1 146 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0078 146 Gene3D Phosphorylase Kinase; domain 1 12 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0078 Lele-ChrLele11 1592295 1593859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0078 2 99 Core Cell Cycle Gene Families AT3G54180 54.717 5.39e-32 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Lele11g0078 None None None