Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0063 ATGGGTCACCCACACACACACACACAGAGAGAAAAGAGTGGGAATCACAATGAGCAAGAAGCACTTGTGATTGTTGATATTAAAGAGGATATAGGGAGAGGGAGTAATACTGCATGCATGTCTGCTCATCTCTCATGATTCAAAAAGAAAAGGGAGAACATGAGTTCTTTTTCGTTTGTTCCACCTGGATTTAGGTTCCATCCCACAGATGAAGAACTTGTTGATTACTACCTGAGGAAGAAAGTGACTTCAAGAAGGATTGACCTTAATGTTATCAAAGATGTGGACCTCTACAAAATTGAACCATGGGATCTTCAAGTCATTCTTAATCTTTCAATTTTTGTAAGATCGATAATGGATCTCCAGGAAGCACATATACTAAGTTCCTTTTTCCTGGTTGATAATTTGGATGTTGCTGATATTTCAAATGAAGAAGGATGGGTTGTGTGTAGAGTATTCAAGAAGAGAATAACAACCATACAGAAAGTGAGTGAGCATGACTCTCCCTGTTGGTATGATGACCAACAAGTCTCGACTTTCATGCAAGACTTGGACTCTCCAAAGCAACAAAATCCTCAACAACCTAATTTGATGTACCACCAAATCCCTATCATCAATAATAATTATCCTTGCAAGAAAGAGATGGAACATCCTCACAACATTCCATTGCTTCACCACCTTCAAACTCGCCACCACTTCCTCCCTCAGCTCCCGCTTTTCGATTACCAGAACCCGAAATTGCTCCAATATCCGGCCATAAACCCTAGCAATACCAACAACTTGATGGCACTATATGGTCTGGATGTGATGAACCATAATCAGCAAACTTTTCAGGCTACTGTTTATGGCGGTAGTAGTAGCCAAGAACAGGTGGCAGCGGACGATGAACAAGTGACCGATTGGCGAGTACTGGACAAGTTTGTCGCTTCACAACTTAGTCAAGGAGATGTGCCTAGTGATAATAAAGGACCACCACAATAA 981 0.4118 MGHPHTHTQREKSGNHNEQEALVIVDIKEDIGRGSNTACMSAHLSXFKKKRENMSSFSFVPPGFRFHPTDEELVDYYLRKKVTSRRIDLNVIKDVDLYKIEPWDLQVILNLSIFVRSIMDLQEAHILSSFFLVDNLDVADISNEEGWVVCRVFKKRITTIQKVSEHDSPCWYDDQQVSTFMQDLDSPKQQNPQQPNLMYHQIPIINNNYPCKKEMEHPHNIPLLHHLQTRHHFLPQLPLFDYQNPKLLQYPAINPSNTNNLMALYGLDVMNHNQQTFQATVYGGSSSQEQVAADDEQVTDWRVLDKFVASQLSQGDVPSDNKGPPQ 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0063 326 SUPERFAMILY NAC domain 56 155 IPR036093 GO:0003677|GO:0006355
Lele11g0063 326 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 60 106 - -
Lele11g0063 326 Pfam No apical meristem (NAM) protein 61 112 IPR003441 GO:0003677|GO:0006355
Lele11g0063 326 Gene3D NAC domain 69 129 IPR036093 GO:0003677|GO:0006355
Lele11g0063 326 ProSiteProfiles NAC domain profile. 60 230 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0063 Lele-ChrLele11 1484017 1486656 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0063 54 312 NAC Transcription Factor Family AT5G62380 28.037 2.22e-26 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele11g0063 NAM 2.1e-13 No_clan