Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0060 ATGGAAGGCAACACTTTCACATTTCTCTCATTTCATCTTCTCTTCGTCAGTCTTCTTCTTTTTCATCATCAAGCTTCAGCCTGCAATAATTCCACCATTAATCCTCCTCCTTCCAATTATTCCAACCAAACCCGCAACACCACCACCATTAATCCTTATCCAAACCAAACTGCGAGTACAACTCACAACAACAGCAGCATGAACAAGTACTACAAATCCTTCGTTTTCACTTCCTGCAATTCCTCGACGTACCCATCAATCTGCTACCAGTACTTATCCAGTTACGCTTCAAAGATCAAAGCAAACCCTTTTATGCTCTGTAATTCCTCTTTATCTGTAGTGCTAAAACAGTCTAAGAAAACTTGTTCAGTGATATCAGATCTTATAAAGAAGAAGAATGTATCAGAGACAGCAGCGAAGGTGTTGAAAGATTGCCTTGACAACGTGAGAAGTTCGATTGATGAGATAAAGGAGTCTCTGGACGATATGAAGCACTTGTATGATAGTTATGATAAGGATTTTCAGATGAGCACGATTAAGACCTATGTCAGTGCCGCCGTTACTGATCATGAGACTTGTTTTGATGGATTGGATGAAGAGAACGTGGGTGCTACTGTAAGGGACAAAGTCAGGAACAGTGTGTTGAATGTGCAGAGAATGACCAGTAATTCTTTGTATTTCATCAACCATCTCAAGTATTGA 702 0.4003 MEGNTFTFLSFHLLFVSLLLFHHQASACNNSTINPPPSNYSNQTRNTTTINPYPNQTASTTHNNSSMNKYYKSFVFTSCNSSTYPSICYQYLSSYASKIKANPFMLCNSSLSVVLKQSKKTCSVISDLIKKKNVSETAAKVLKDCLDNVRSSIDEIKESLDDMKHLYDSYDKDFQMSTIKTYVSAAVTDHETCFDGLDEENVGATVRDKVRNSVLNVQRMTSNSLYFINHLKY 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0060 233 Pfam Plant invertase/pectin methylesterase inhibitor 74 225 IPR006501 GO:0004857
Lele11g0060 233 SMART PMEI_2 70 227 IPR006501 GO:0004857
Lele11g0060 233 Coils Coil 146 173 - -
Lele11g0060 233 CDD PMEI-like_3 77 231 - -
Lele11g0060 233 Gene3D Invertase/pectin methylesterase inhibitor family protein 70 232 IPR035513 -
Lele11g0060 233 TIGRFAM PME_inhib: pectinesterase inhibitor domain 65 231 IPR006501 GO:0004857
Lele11g0060 233 PANTHER PECTINESTERASE INHIBITOR-LIKE 14 225 - -
Lele11g0060 233 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 73 231 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0060 Lele-ChrLele11 1459965 1460666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0060 58 231 Carbohydrate Esterase AT3G14310 24.432 1.74e-14 70.5