Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0057 ATGACCAAACCCTCTCTCCTCTATCTTCTCTCTCTCCTTGCCGCGGTCACCGCCCTTGCCGCCGCCGCCACCTCCTCCTCGCCGTCAAACTTCATCAAAACCTCCTGCAGCACCACCACATACCCTTCCCTCTGCTACAAATCCCTCGCCGACTACGCCTCCACCATCCAAGAAGACCCTCACCAGCTCGTCCAGACCGCCCTGTCCTACTCCCTCAACAAGACCTTTGAGACCCGAGCCTTCGTGTCCAAGCTCCGGTCCATCTCCGGCCTGAAACCCCGTGAAGTCGCCGCCCTCCGGGACTGCATCGAAGAGATGGCTGACAGCGTGGAGCGGCTCGGCAGGTCGCTGAAGGAGCTGAAGCTGTGTAAGCCCAAGAGCGAGGACTTCTCGTGGCACATGAGCAATGTAGAGACGTGGGTGAGCTCTGCGTTGACCGATGAGAGTACTTGCAGCGATGGGTTCGCCGGAAAAGCTTTGAACGGCAAAATAAAGGCTTCTATCAGAGCCAGGATGGTTAATGTTGCTCATGTCACTAGTAATTCTTTGTCTCTTATAAACAAGTACGCATCTGGTAATTACTGA 585 0.5556 MTKPSLLYLLSLLAAVTALAAAATSSSPSNFIKTSCSTTTYPSLCYKSLADYASTIQEDPHQLVQTALSYSLNKTFETRAFVSKLRSISGLKPREVAALRDCIEEMADSVERLGRSLKELKLCKPKSEDFSWHMSNVETWVSSALTDESTCSDGFAGKALNGKIKASIRARMVNVAHVTSNSLSLINKYASGNY 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0057 194 CDD PMEI-like_3 34 191 - -
Lele11g0057 194 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 189 IPR035513 -
Lele11g0057 194 FunFam Pectin methylesterase inhibitor 1 27 189 - -
Lele11g0057 194 Gene3D Invertase/pectin methylesterase inhibitor family protein 26 189 IPR035513 -
Lele11g0057 194 Pfam Plant invertase/pectin methylesterase inhibitor 30 185 IPR006501 GO:0004857
Lele11g0057 194 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 185 - -
Lele11g0057 194 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 189 IPR006501 GO:0004857
Lele11g0057 194 SMART PMEI_2 27 185 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0057 Lele-ChrLele11 1447750 1448334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0057 25 186 Carbohydrate Esterase AT1G53830 28.916 1.07e-20 87.0