Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0022 ATGGGTTCTTCGAATAACGGTGGGGTGCCGCCGGGTTTCCGGTTTCATCCGACAGATGAAGAGCTTCTTCATTATTACTTGAAGAGGAAGGTGAACTTTCAGAAGTTTGAAATGGAGGTCATTAGAGAAGTGGACTTGAACAAGATTGAGCCTTGGGACTTGCAAGATAAAGGAGAATGAGTGTTCAAGAAGAAGAACCTATTCAAGATTGGGAATGAAGGAAGCTCCATGCATAACGCAGACCAACAACTCAACAATTCCTCAAGCATCAATCAACCTCGCTCCTTCATGAACAGAGAGAGCCAATACTTACTTCATCATCATCAACAGCAACAAAACCCTAGAAACTCTTCTGGCTTCCTGCTCGAAAAGCCTGAGCTTTCTCTTCATTATCCTCCTCCTCACTTGCAAAACCCTCAATACTCCCTCTTCCAGGCTCAACCCCTCCTTCCTACTGCAGCTCACTACAGTTCATATTCATCAGCCCTACCTACAGACCCAGCTCCCATGGCCGCCAAACAACTCATGACGAACCCGGCCGCCGGCGACTGCGATAGTGGCAGAGAGGGCTTGAGGTACCAAGTTTCAGAGACTGCAAATATGGAGGCTGGCACGTGTGAGCCCGCAGGTCATCAAGAGATTAATGGAACAGCAAGAGAAGATCAAGGGTTTAATGAATGGGGCGTGCTTGATAGGCTTGTGGTCACTTCTCATCATCTTGTAAATGAAGAATCATCCAAAGGGGTTAGGTTTGAGGATGCAAATAATAACCCACAATCTGTTAATCAGATCAATCATCAGCAGCAACCTTCATTGCGTGGAGAAGTCGACTTTTGGGGCTATGGAAAACAATAA 855 0.462 MGSSNNGGVPPGFRFHPTDEELLHYYLKRKVNFQKFEMEVIREVDLNKIEPWDLQDKGEXVFKKKNLFKIGNEGSSMHNADQQLNNSSSINQPRSFMNRESQYLLHHHQQQQNPRNSSGFLLEKPELSLHYPPPHLQNPQYSLFQAQPLLPTAAHYSSYSSALPTDPAPMAAKQLMTNPAAGDCDSGREGLRYQVSETANMEAGTCEPAGHQEINGTAREDQGFNEWGVLDRLVVTSHHLVNEESSKGVRFEDANNNPQSVNQINHQQQPSLRGEVDFWGYGKQ 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0022 284 Gene3D NAC domain 18 118 IPR036093 GO:0003677|GO:0006355
Lele11g0022 284 Pfam No apical meristem (NAM) protein 10 66 IPR003441 GO:0003677|GO:0006355
Lele11g0022 284 MobiDBLite consensus disorder prediction 73 93 - -
Lele11g0022 284 ProSiteProfiles NAC domain profile. 9 149 IPR003441 GO:0003677|GO:0006355
Lele11g0022 284 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 58 - -
Lele11g0022 284 SUPERFAMILY NAC domain 8 68 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0022 Lele-ChrLele11 1172781 1175377 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0022 61 283 NAC Transcription Factor Family AT4G10350 37.991 7.45e-32 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele11g0022 NAM 4.9e-14 No_clan