Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0006 ATGTCTCTTAACATGAAAACCCTAACGCAAGCCTTGGCCAAGACCGCGGTAGTCATCGACAAGAAGGTTCAGACCACCGTGCAGGAGGTCACCGGACCCAAGGCTCTCCAGGACTACGACCTCCTTGATCAGATCGCATCCGCCGGGCATGGTCTCGCGCGAATGCGTGCTGGGCTAACCAAGGCAGCTGAAGATTCATTTTTGGATTTGATTCAGGCCGATGCGGGTAAACTGGTGCGATTAAGGCATCCCGGGGTGGTGCATGTGGTGCAAGCGTTGGATGAGAGCAAGAATGCGATGGCAATGGTGACTGAACCTTTGTTTGCATTGGTAGCTAATACTCTTGGGAATTTGGAGAATGTCGCCAATGTTCCTAAGGTGCTCAGGGGAATGGACATGGGACTGTTGGAAGTGAAGCATGGGTTACTTCAGGTGGCAGAATCCCTGGACTTCCTGCACAACCATGCCCATCTTATTCATCAGGCGGTATCACTGGAGAATATTCTTATCACCTCAAGTGGAGCTTGGAAACTCGGTGGATTTGGTTTGGCAGTTTCAGCAGCTCAGGCCTCTGGTGACTCAACTAATCTGCAAGCTTTCCATTATGCTCCATCACTTAATTACACTACTCCTGAGCTGGTTAAGAGAACTGTGTCCTCAGCTGGGTGGGCTTCTGATATTTTCAGTTTTGGTTGTGTTGCTTACCGTTTAATTTCTCGCAAGTCTTTGTTTGACTGCCACAACAATGTGAAGATGGTATATATGAGTCCACAGTCTACCCTTTTCATGGAATTTGGCTTATATTTAGTTTTATGCTTTTCATTAGGAGATTGCAATTGTAAACCTGGAATTTTACTTCTGCAGTACATGAATACCTTGACCTACATATCCAGTGACATGTTCTCATCTATTCCACCGGAGTTGGTTCCTGACTTGCAGAGGATGCTATCTTCAAATGAGTCTTCAAGACCAACTGCAATGGCTTTTACAGGCTCTCCTTTTTTTCGGAATGACACTAGGTTACGTGCTCTGTGCTTCCTTGACCATATGCTTGAAAGAGATAACATGCAGAAGTCAGAATTCTTAAAAGCTTTGTCAGATATGTGGAAAGATTTTGACAGCCGTGTATTGCGGTACAAGGTCCTTCCACCTCTCTGTGCTGAACTTAGGAATGTGGTAATGCAGCCAATGATTCTTCCTATGGTTCTTACTATTGCAGAATCTCAGGATAAAAGTGATTTTGAGATCGCAACTCTTCCAGCACTTGTTCATGTATTGAGTGCTGCAGCAGGTGAGACATTGTTGCTACTTGTGAAGCATGCTAAACTTTTTATAAACAAGATTAGTCAGGGTCATTTAGTTTCACATGTTCTGCCTATGGTTGTTCGGGCTTTCGATGAAAATGATGCTCGTGTACAAGAAGAGGTTATGAAGAAATCTATATCCCTTGTTAAGCAACTTGATACCCAGCTGGTCAAGCAAGTGGTTTTGCCTCGTGTTCATGGCTTAGCGCTTAAAACAACAACTGCAGTGGCATGAGACATGGTTAGCCGACTTGATAAACCTGCTGTCGTAGACATCTTGCAGACTATTCAGCGCTGTACTGCTGTTGACCGTTCTCCTCCTACCCTTATGTGTACCCTTGGGGTTGCAAATTCTATTTATAAGCGGTATGGAGTAGAGTTTGTTGCTGAGCATGTGCTTCCATTGGTTATACCCCTCCTGACAACTCAACAACTGAATGTTCAGCAGTTTGCCAAATATATGCTCTTTGTCAAGGATATGCTAAGGATGATAGAGGAGAAGCGAGGAGTGGTTGTGACAGAATCTGGAATCCCAGAGGTCGCCAAACCATTTCCTTCAACTAATGGTCTTCATAATGAAGCGACTACTAAAACAAACAGCACTGTTGCTTCTTTAACCAAGAGCAGCTCTTCCTGGGATGAAGATTGGGGTAGCGCTACCAAAGGGAGTCCCACTTCTTGCCAAAGTTTTACTGAGAAGTCAAGTCAACCCGTGCCAGGAATCCCAATGGTTCAAATTACATCTTCACAGCAACATTCATCCTCATCTGGCGTGTCTAATCAGGAGGCAACCATGTCATGCCCCTCAGTGGATTTAGAGTGGCCTCCTCGCACTTCTGCTGCTGGTAACCAAAATTTAGGTGATTTTGAAAGTCATATGAAGTCAACAGCAACCTCTTCTATGTCTATTCTTGACGACATTGATCCTTTTGCTACTCCACATCCTAGTGGCTCATTAGGTGTATCTGAAATTTCCAACAATGGTACTTTAGCACCACCACTAAACAAAAATGGACCTAGTTTGGTGTCAAACACCTCGAATGTGATGAATAATCTAACGAACAATAGTTGTTCTTTTAATCCCCCAAGTTCAACAGATCCAATTGGTTTGAACCTTGGTAATTCTAGTTCAACCACTGGTAGCCTGCATGGTGGTATAAATTCTCAGAATTCTCTAGCGTACTTAAAGCAGAGTCAGAGATTTCCAGCATCTAATGGTCCCCATGCAGAGAAAAAGTCAACAGATCTTAGATCCATCTTTGCTTCTGATCAGAATGACCTGATGGCACCTAAGCTGGCACCATCGCCCTCAACCACACTGGGTAGAGGTAGAGGAAGAGGAAGAGGGAGGGGAGCTGCTTCAAGCACTAGGTCCACTCAAACCAAGTCTGAGGAGCCACCCCTTATGGATTTGTTGGGGTAG 2727 0.4474 MSLNMKTLTQALAKTAVVIDKKVQTTVQEVTGPKALQDYDLLDQIASAGHGLARMRAGLTKAAEDSFLDLIQADAGKLVRLRHPGVVHVVQALDESKNAMAMVTEPLFALVANTLGNLENVANVPKVLRGMDMGLLEVKHGLLQVAESLDFLHNHAHLIHQAVSLENILITSSGAWKLGGFGLAVSAAQASGDSTNLQAFHYAPSLNYTTPELVKRTVSSAGWASDIFSFGCVAYRLISRKSLFDCHNNVKMVYMSPQSTLFMEFGLYLVLCFSLGDCNCKPGILLLQYMNTLTYISSDMFSSIPPELVPDLQRMLSSNESSRPTAMAFTGSPFFRNDTRLRALCFLDHMLERDNMQKSEFLKALSDMWKDFDSRVLRYKVLPPLCAELRNVVMQPMILPMVLTIAESQDKSDFEIATLPALVHVLSAAAGETLLLLVKHAKLFINKISQGHLVSHVLPMVVRAFDENDARVQEEVMKKSISLVKQLDTQLVKQVVLPRVHGLALKTTTAVAXDMVSRLDKPAVVDILQTIQRCTAVDRSPPTLMCTLGVANSIYKRYGVEFVAEHVLPLVIPLLTTQQLNVQQFAKYMLFVKDMLRMIEEKRGVVVTESGIPEVAKPFPSTNGLHNEATTKTNSTVASLTKSSSSWDEDWGSATKGSPTSCQSFTEKSSQPVPGIPMVQITSSQQHSSSSGVSNQEATMSCPSVDLEWPPRTSAAGNQNLGDFESHMKSTATSSMSILDDIDPFATPHPSGSLGVSEISNNGTLAPPLNKNGPSLVSNTSNVMNNLTNNSCSFNPPSSTDPIGLNLGNSSSTTGSLHGGINSQNSLAYLKQSQRFPASNGPHAEKKSTDLRSIFASDQNDLMAPKLAPSPSTTLGRGRGRGRGRGAASSTRSTQTKSEEPPLMDLLG 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0006 908 MobiDBLite consensus disorder prediction 623 676 - -
Lele11g0006 908 SMART serkin_6 39 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0006 908 Pfam Protein kinase domain 78 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0006 908 MobiDBLite consensus disorder prediction 788 908 - -
Lele11g0006 908 MobiDBLite consensus disorder prediction 788 839 - -
Lele11g0006 908 MobiDBLite consensus disorder prediction 618 676 - -
Lele11g0006 908 Gene3D - 340 603 IPR011989 -
Lele11g0006 908 CDD PK_SCY1_like 60 337 - -
Lele11g0006 908 Gene3D Transferase(Phosphotransferase) domain 1 71 339 - -
Lele11g0006 908 MobiDBLite consensus disorder prediction 703 725 - -
Lele11g0006 908 ProSiteProfiles Protein kinase domain profile. 1 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0006 908 SUPERFAMILY ARM repeat 287 596 IPR016024 -
Lele11g0006 908 SUPERFAMILY Protein kinase-like (PK-like) 64 339 IPR011009 -
Lele11g0006 908 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 60 892 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0006 Lele-ChrLele11 1029326 1040259 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0006 39 340 MAP Kinase Kinase Kinase AT3G13530 24.290 2.46e-08 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL2 Lele11g0006 Pkinase 9e-20 CL0016