Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1268 ATGGAGTCAGATCTCCAGCCTCACCTTCCCATGTTTCGCGATCAGCAGCAGATGAATTCGGGCCTCACGCGTTACCGATCGGCGCCCACTTCCTATTTTACCGATATAATTGACAAGGAGTGCTATGAGCATATATTCAATCGACCGTCTAGCCCCGAGACTGAGCGAGTTTTTTCGCGCCTTATCAGTAGTTTTGCTGAGGACCCCCCTCCTCAAAGTCTCGCGTCCCTTCCTGTAAAGCAAGAGGACGGCCTGAACCAGCAGGCTCAAGCTCAGGCTCAGTCTCAGCCCATGTCGTCCGTCAATAATGAACCAGCGCTTCTGCGGCGGCAGCAGAACAACATGAATACTTACGAGAGTGCTCCTCGTAATTTATACACGAGCTCAGCGAAACCGCCTCTGCCAAATCAGAGCCTCCCCTCGGCGAATCGGTTGCCACACATGAAGACTGGACTTGGGAAAACTACTTCTAATCTTACCAGGCATAATAGCTCCCCTGCAGGACTCTTTGCTAACTTCAACATTGATCCTGGCTATGTTGCGGCTGTGAGAGGCATGGGAACTTTTGCAGCTGCAGATAACGCTACCGAAGCGACAAACTTTTCTTCTGCAGGGACGTTGAAGAACCGACTGGCTTACTCGTCGGGGTTAATGTCATCCATAGCTGAAATCGGAGATAAAAACAGCATAGAGTTAGATAATCCCCAGAAGGAGGCCTTTAGTGAAAGCCAGGGCAATGATTTTATGTCGGCTTTCCCTTTAGATCCTTGGGACGATTCTGCAATAGCGTCTGACAATATTAGTGGTCATAAAAGATACAGAGATGATGAGAATGATGCAAAACCATTTTCTGGTTTAAGTGCGGCGGAAGCCAAGAATGAGATGGGAACCCAGGGCAGTGGTCCTTCCCCATTGACTCATCACTTGAGTTTGCCGAAAACTGCAACGGAGATGGCAGCCATAGAGAAGATATTCCAGTACTCAGATTCTGTTCCCTGTAAAATTCGTGCCAAGCGAGGCTGTGCCACTCACCCCCGAAGCATTGCAGAGCGGGTTAGAAGAACTAAAATTAGCGAGCGCATGAGGAAACTACAAGATCTGGTTCCCAACATGGACAAGCAAACAAACACGGCAGACATGTTGGACTTGGCTGTCAACTACATTAAAGACCTTCAAAAGCAGGTTCAGGCACTTTCAGACAGCCGATCTAGATGTACGTGTTTGCAGAGGCAGCATCAATAA 1242 0.4871 MESDLQPHLPMFRDQQQMNSGLTRYRSAPTSYFTDIIDKECYEHIFNRPSSPETERVFSRLISSFAEDPPPQSLASLPVKQEDGLNQQAQAQAQSQPMSSVNNEPALLRRQQNNMNTYESAPRNLYTSSAKPPLPNQSLPSANRLPHMKTGLGKTTSNLTRHNSSPAGLFANFNIDPGYVAAVRGMGTFAAADNATEATNFSSAGTLKNRLAYSSGLMSSIAEIGDKNSIELDNPQKEAFSESQGNDFMSAFPLDPWDDSAIASDNISGHKRYRDDENDAKPFSGLSAAEAKNEMGTQGSGPSPLTHHLSLPKTATEMAAIEKIFQYSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVNYIKDLQKQVQALSDSRSRCTCLQRQHQ 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1268 413 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 117 409 - -
Lele10g1268 413 Pfam Helix-loop-helix DNA-binding domain 346 392 IPR011598 GO:0046983
Lele10g1268 413 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 341 391 IPR011598 GO:0046983
Lele10g1268 413 MobiDBLite consensus disorder prediction 123 144 - -
Lele10g1268 413 FunFam Transcription factor bHLH130 family 342 411 - -
Lele10g1268 413 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 344 407 IPR036638 GO:0046983
Lele10g1268 413 SMART finulus 347 397 IPR011598 GO:0046983
Lele10g1268 413 Gene3D - 342 412 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1268 Lele-ChrLele10 23605929 23607929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g1268 1 407 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 38.799 2.49e-75 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele10g1268 HLH 1.1e-09 No_clan