Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1264 ATGAAAAAGGGGGGGGGGGGGTTGAAGAGGAGCATTACTGGAAGGGAAGATAAGGAGCCGAGAATGAGGAAATGTTGGAAAGGAGCAGAGGAGTTCCGAATAGGAGGATCTGTGGGATGCTGGAAGAGGAGGGTGAGAAATGAAGGAGCAATGAAACGGCATCTCTCTGTCTCGAAACATCTTCCCTTCACCATCACAGAGAGAGATATGGATTCAGCAACTCCACCGTCGCCGGAGCTGAAACTCGACAAGTTAAGAGCGCTCAAGGTCTTGGGTAAGGGTGCCATGGGTACCGTCTTCCTCGTCCACGACATCGTAGCCGATCCTTCTGCTCGCTGCCCCTTCGCCCTCAAGGTCGTCGAGAAATCCTCCTTCCACAGCAAGCTCGACGCCGACCGTCGTGCCCGCTGGGAAATCCATGTCCTCTCTCGCTTGACTCACCCATTCCTTCCTTCCCTTTTAGGGACATTTGAGAGCCATCAATTCTTGGCCTGGGCCATCCCTTATTGTCCGGGCGGCGACCTCAACGTCCTTCGTTACCGTCAAACTGATCGGGTCTTCGCCCCTTCCGTCATACGCTTCTATTTGGCCGAGATCATCTGCGCTTTAGAGCATCTTCATTCCCTGGGGATCGCCTATCGTGATTTGAAGCCGGAGAATGTCCTTGTCCAGCAGTCCGGTCACGTGACCCTCACGGACTTCGATCTGTCTCGCTATCTCACCCCCAAAACCATCAAAACCGCCATCACCGTCCGACAAAATCCGTCCGATGTTGACCGAAGCAAGCATCGCCGCAATTTCACGCGCTGGATTCCAGTCCCGCCAGACATTATTCACAGAATGAAAGGATTGAAGAAGGCCAAGTCCGCCCGAGTCATCCCGGTGAGCAGGAGGAAAGCGAGTTTCTCAAATGGCGAGCGTTCAAACTCGTTCGTCGGCACAGAAGAGTACGTTTCGCCCGAGATCGTTCGCGGCGAGGGGCACGAGTTCGCCGTCGACTGGTGGGCCCTGGGCATATTGACGTACGAGATGCTGTATGGCACGACGCCGTTTAAGGGAAGGAATCGGAAGGAGACGTTTCGGAACGTTTTGACGAGAGCGCCAGCATTCGTAGGGAAGAGAACGACATTAACGGACTTGATCGAACGGTTGCTGGAGAAAGACCCCACAAAGCGATTGGGGTACGCGCGCGGTGCCAGCGACATGAAGGAGCACGATTTCTTCAGAGGGGTCAGGTGGGACCTCCTAACGGAGGTGGTAAGGCCGCCGTTTATTCCGTCGAGAGAGGATGGGGAGGGGACGGAGAGATGGAGTAGAGGCGGGGTGGACATAGGGGAATACTTCGAGAGATTCAGATCGGCGGCGTCGATGCCAGCGTCACCGGAGAAACGGCGGGATATGTCTTTAACAGAATTCTAA 1419 0.5497 MKKGGGGLKRSITGREDKEPRMRKCWKGAEEFRIGGSVGCWKRRVRNEGAMKRHLSVSKHLPFTITERDMDSATPPSPELKLDKLRALKVLGKGAMGTVFLVHDIVADPSARCPFALKVVEKSSFHSKLDADRRARWEIHVLSRLTHPFLPSLLGTFESHQFLAWAIPYCPGGDLNVLRYRQTDRVFAPSVIRFYLAEIICALEHLHSLGIAYRDLKPENVLVQQSGHVTLTDFDLSRYLTPKTIKTAITVRQNPSDVDRSKHRRNFTRWIPVPPDIIHRMKGLKKAKSARVIPVSRRKASFSNGERSNSFVGTEEYVSPEIVRGEGHEFAVDWWALGILTYEMLYGTTPFKGRNRKETFRNVLTRAPAFVGKRTTLTDLIERLLEKDPTKRLGYARGASDMKEHDFFRGVRWDLLTEVVRPPFIPSREDGEGTERWSRGGVDIGEYFERFRSAASMPASPEKRRDMSLTEF 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1264 472 SUPERFAMILY Protein kinase-like (PK-like) 82 431 IPR011009 -
Lele10g1264 472 Gene3D Transferase(Phosphotransferase) domain 1 174 244 - -
Lele10g1264 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
Lele10g1264 472 MobiDBLite consensus disorder prediction 1 20 - -
Lele10g1264 472 PANTHER FLIPPASE KINASE 1-RELATED 78 428 - -
Lele10g1264 472 Gene3D Phosphorylase Kinase; domain 1 85 173 - -
Lele10g1264 472 FunFam Serine/threonine-protein kinase OXI1 306 427 - -
Lele10g1264 472 SMART serkin_6 85 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g1264 472 FunFam Serine/threonine-protein kinase OXI1 174 242 - -
Lele10g1264 472 Pfam Protein kinase domain 302 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g1264 472 Pfam Protein kinase domain 88 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g1264 472 Gene3D Transferase(Phosphotransferase) domain 1 303 427 - -
Lele10g1264 472 ProSitePatterns Protein kinases ATP-binding region signature. 91 118 IPR017441 GO:0005524
Lele10g1264 472 ProSiteProfiles Protein kinase domain profile. 85 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g1264 472 FunFam Serine/threonine-protein kinase UCNL 85 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1264 Lele-ChrLele10 23588109 23591772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g1264 80 461 AGC Kinase Gene Family AT3G20830 62.113 4.04e-163 465
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele10g1264 Pkinase 4.9e-31 CL0016