Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1260 ATGACCGACCCCAATAATGCCTTCAATTCTCCCTCCCTTTTCTCTTCTTCCTCGTCTTGTTCCTTCAACTTTCCTTCTACTCATCATTATAACTCTCCTCCAAGAGAAGCCCTACCTCTTCTTAATCTAAGCCCTCCAAGACTTGATGATGAAGACGATGTGAAAGAAGAAGCAGGCATGGGGATGGCGGGTAGTTCTTTGAATGATGATTCTGTGACGCTAGCTTTGCAATTACACCTGGGGCTTCCAACCTCAAGTACTTCATCGCCTGACTTGCCTGATTCGAACCCATATTCCTCAGAGACAGTAGTTTCAGACAAAGATGAAGTCACCACTGTATCTTCTGGGTATCTCTCTGATAGGATCACCCGAGGCGGTCAGTATTGGATCCCTACCCCTGCTCAGATTCTGATTGGTCCCACACAGTTCTCTTGCCCTCTTTGTTTCAAGACCTTTAACAGATACAACAACATGCAGATGCATATGTGGGGACATGGATCTGAATACAGAAGGGGACCAGAGTCTCTGAGAGGAACACAGCCAACAGCAATGCTGAGGCTTCCGTGCTATTGTTGTGCACCTGGGTGCAAGAACAACATCGAGCATCCGAGAGCCAAACCTCTGAAGGACTTCAGAACCCTTCAAACACATTACAAGAGAAAGCATGGGATAAAGCCTTTCATGTGTAGAAAATGTTGCAAAGCATTTGCAGTGAGAGGAGATTGGAGAACTCACGAGAAGAACTGTGGGAAGCTCTGGTATTGCTCATGTGGCTCTGACTTCAAGCATAAAAGATCTCTTAAAGATCATATCAAGGCTTTCGGACATGCCCACACGCCTTGTGATGTTGATCATAACTGTCTCCATCAAGATCATGAAGTGGCCTCTGAAATTGACCACCCAAATGATTCCTTTCACTCTCATCATAACTAA 933 0.4544 MTDPNNAFNSPSLFSSSSSCSFNFPSTHHYNSPPREALPLLNLSPPRLDDEDDVKEEAGMGMAGSSLNDDSVTLALQLHLGLPTSSTSSPDLPDSNPYSSETVVSDKDEVTTVSSGYLSDRITRGGQYWIPTPAQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSEYRRGPESLRGTQPTAMLRLPCYCCAPGCKNNIEHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHIKAFGHAHTPCDVDHNCLHQDHEVASEIDHPNDSFHSHHN 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1260 310 MobiDBLite consensus disorder prediction 83 106 - -
Lele10g1260 310 PANTHER ZINC FINGER PROTEIN WIP2 12 300 IPR043584 GO:0003700|GO:0010468
Lele10g1260 310 FunFam Zinc finger protein WIP2 196 278 - -
Lele10g1260 310 ProSitePatterns Zinc finger C2H2 type domain signature. 145 165 IPR013087 -
Lele10g1260 310 ProSiteProfiles Zinc finger C2H2 type domain profile. 143 170 IPR013087 -
Lele10g1260 310 SUPERFAMILY beta-beta-alpha zinc fingers 139 166 IPR036236 -
Lele10g1260 310 SUPERFAMILY beta-beta-alpha zinc fingers 209 247 IPR036236 -
Lele10g1260 310 Gene3D Classic Zinc Finger 142 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1260 Lele-ChrLele10 23569927 23571772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g1260 31 299 C2H2 Transcription Factor Family AT1G51220 64.184 2.25e-121 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele10g1260 None None None