Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1254 ATGGCTACGCTCTGAGAAGCTGGTTTAATACATGATTTTCTGCAGGAAGACTTTGAAAACTTTTGGTCAGAATGCCCATGGGAAGAGGATTTAAAGTATGCCAGAGCTGTTTGCAATCAGGTTTCTTTCATTATTGAAGAGTATCGTTGTGGGCGTACACCTAATGCAGATGTTATCTGTAATACCAGAATAAAATTTGGTGCATTCATGGATGCAATCGGCAATATGGGGTTTGACTATGTTTCCTCTGGACATTATGTAAGTGTTGTCCATCCACATGAAAATCAAATGGATGAGCCGTCTGTTCTGGAACTATCACAAGACATGATCAAGGATCAAACATACTTCCTTTCACACCTCTCCCAATCCCTGCTGAAGCGACTTGTTTTTCCACCTGGTTGTATTTCCAAGGAAGAAGTCCGCAGACTTGCTGCAAAATTTGATCTGCCAAATAAGGATAGAAGAGATTCACAAGGAATATGCTCCCTGGGCAAGCAAGACACATTGGAGAGAGAGAAGGCATCATACTGGAAGCTGAGACTGGAGATTTCATCAGCAAACATTGAGGCTTCTGGTTTCATACGATTGGTCAACGCTAGGGTCTACGGCTACCCGGAGGCCCATGGTTTGTTCTCTGGCTATTTCTCTACAGCATCAGCGTCTACTTCTGTTGGTTCTTTAAAATGGCTTAGTGGACTGCCTCCAAGCCAGACAAACCAGCCCCAGTGCAAGGTGGAAAGCTCAAACTTGGATTCCCGTTTTTTTGGTAATGTAAGACATGGTCCAGGCTTCTCTAATTGCAGTTTACAATGGGAAGGAGATTTAGATGGGGTAAAAGACACTGCAGTAGTCCACTTGAATGAAGATGATCAAGGTCTGGCAGCTGGGCAATTTGCAGCATTCTATGAGGGAAGTACTTGCATAGGCTCTGGCGTGATATTGGAGTCATGGGATGATCCAGGTTTTCCTGTTTGCACAAAAGCTTTAGAAATTGCGAGAATGGAAGATAAATCAAAGCTAGGGAATCCAGTCAAGATCAAACTCAAATGGTGGTTGATTGAATCAAATTCAATTCATTATTCAACTGTATTGATGTCTGCTGATCTAATTGATGATTGGTTCAAAGAGGTTGAGATTGATCAAAGATACGTTATGGCTGCAGCTGCGCAGCATCTGACACCTGTGACTTTGGAGTTGGGTGGGAAATGCCCTGCTGTTGTCGATTCCCTTTCCGCTTCTTGGGACACACAGGTGGATTTCATTTTAGCATCTGAATTAAGATTAGACCAAGAAATGAATGTGCTGAAAATTCCATGCAGATTTATTGAACAGACAATATTGGTGGATCCTCCACTGGAATCGGCAATCATGACGGAAGAAATCTTCGGCCCTCTGCTCCCAGTTATTACTTATGTGGCAGATACGATTCCTTTTGGAGGCGTAGGGGGGAGTGGATTTGATGCATGCAGTCATGAGAAGGCAGTGGCGCAACGAAGCTTCTACGCGGATTTGTGGTTTAGGTATCCTCCATGTAGTCTTGAAAAGTTTCAACTTCTTGAAGTGACTTACAATTTGGACTATCTTGGCATGCTTCTCATCTTGCTCGGCTTAAAGAAAACTAAACGCTACTCCATTTGGAAAGGCATGTGA 1650 0.4321 MATLXEAGLIHDFLQEDFENFWSECPWEEDLKYARAVCNQVSFIIEEYRCGRTPNADVICNTRIKFGAFMDAIGNMGFDYVSSGHYVSVVHPHENQMDEPSVLELSQDMIKDQTYFLSHLSQSLLKRLVFPPGCISKEEVRRLAAKFDLPNKDRRDSQGICSLGKQDTLEREKASYWKLRLEISSANIEASGFIRLVNARVYGYPEAHGLFSGYFSTASASTSVGSLKWLSGLPPSQTNQPQCKVESSNLDSRFFGNVRHGPGFSNCSLQWEGDLDGVKDTAVVHLNEDDQGLAAGQFAAFYEGSTCIGSGVILESWDDPGFPVCTKALEIARMEDKSKLGNPVKIKLKWWLIESNSIHYSTVLMSADLIDDWFKEVEIDQRYVMAAAAQHLTPVTLELGGKCPAVVDSLSASWDTQVDFILASELRLDQEMNVLKIPCRFIEQTILVDPPLESAIMTEEIFGPLLPVITYVADTIPFGGVGGSGFDACSHEKAVAQRSFYADLWFRYPPCSLEKFQLLEVTYNLDYLGMLLILLGLKKTKRYSIWKGM 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1254 549 Pfam Aminomethyltransferase beta-barrel domain 250 313 IPR046885 -
Lele10g1254 549 Pfam tRNA methyl transferase HUP domain 43 164 - -
Lele10g1254 549 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 23 167 - -
Lele10g1254 549 PANTHER - 10 165 - -
Lele10g1254 549 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 401 418 IPR016163 GO:0016620
Lele10g1254 549 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 440 471 IPR016163 GO:0016620
Lele10g1254 549 SUPERFAMILY ALDH-like 382 519 IPR016161 GO:0016491
Lele10g1254 549 Gene3D Translation factors 219 319 - -
Lele10g1254 549 Gene3D HUPs 7 170 IPR014729 -
Lele10g1254 549 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 382 400 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1254 Lele-ChrLele10 23528817 23534259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g1254 382 539 Aldehyde Dehydrogenase Gene Family AT4G36250 27.178 6.40e-19 87.8