Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1252 ATGAGGAAGTCGCCGGAGCCCTCTGGAAAAAACAAGCAGCTTAGAAAGGGTTTGTGGTCACCGGAAGAAGATGACAAGCTCGTGAGGTACATGCGCAACAATGGACAAGGTTGTTGGAGTGATGTGGCCAGAAATGCTGGCTTGCAAAGGTGCTATATATGTTTCATGTTAACTGAAAGATGGTCTCAAATAGCGGCACGCTTGCCAGGTCGAACAGACAATGAGATAAAAAACTTTTGGAATTCCACAATTAAAAGAAGACTCAAGAACTCTTTGGCCACGAAAGACGTCAATATGGAAGGGTTTGTTTCAGCTCAAGATCATCAACACATCTTTAATGGGCATATGTTGAACTCGTCTCCATCTTCATCCACAGTTGACAGGATTCCTCAGCGAAGCTTGCAATTTGCAGGTGGATTACTCTCAGCAAGTCAAGTGGTTCAGAAAGTGGAGAGCACGTGCCACCCACACACTACTACCAATGGTTACTTTGAAGACGTAAACAGTGAGAGAGCTGAGAGTTGTGATATGAGATGGACGGTGTCACTCTCGCCACTACATAGAGGAAGAGCTACAAAGCACCCAGGCCACCAATTCGTGAGCGCCATCGTCCCTCCATTCCCAACGGTCCCAATTCCTCCTTCAGATTCCACATTCCAGGTCCTCATGCTACTGCTCTCCTGA 684 0.4678 MRKSPEPSGKNKQLRKGLWSPEEDDKLVRYMRNNGQGCWSDVARNAGLQRCYICFMLTERWSQIAARLPGRTDNEIKNFWNSTIKRRLKNSLATKDVNMEGFVSAQDHQHIFNGHMLNSSPSSSTVDRIPQRSLQFAGGLLSASQVVQKVESTCHPHTTTNGYFEDVNSERAESCDMRWTVSLSPLHRGRATKHPGHQFVSAIVPPFPTVPIPPSDSTFQVLMLLLS 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1252 227 CDD SANT 19 81 IPR001005 -
Lele10g1252 227 Gene3D - 13 50 - -
Lele10g1252 227 Gene3D - 51 101 - -
Lele10g1252 227 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 88 IPR017930 -
Lele10g1252 227 SUPERFAMILY Homeodomain-like 14 80 IPR009057 -
Lele10g1252 227 ProSiteProfiles Myb-like domain profile. 11 84 IPR001005 -
Lele10g1252 227 Pfam Myb-like DNA-binding domain 19 91 - -
Lele10g1252 227 SMART sant 15 86 IPR001005 -
Lele10g1252 227 PANTHER MYB DOMAIN PROTEIN 55 9 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1252 Lele-ChrLele10 23519909 23522102 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g1252 12 89 MYB Transcription Factor Family AT5G12870 57.407 3.19e-34 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele10g1252 Myb_DNA-bind_6 3.2e-06 CL0123