Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1241 ATGTATGGATTTGCTCCGCCTCTAACTGGAAACAATTGCCTTTACTGCGCTAAGCTGTGTTTTAGATCCCTCGGACCTTCCTGGCTTCTGCAAAACCTAGCTAATTCTTCCGTACCCAATAGTACATTCAGTTATCGACGTGAGTTTAATCCCCTTCTATTTCAATCGGAATCCGGTTCGCCTTCCTGCTGGAACTATAAGAAGCACACAAGAGGTAGCACTCTTCTGAAAGCTAGCCGTCGGGAGTCTCCTTACGAAGTTTTGGGCGTATCTCCGTCAGCTACAGCGGATGAAATAAAAAAGGCATACAGAAAACTTGCTCTTAAGTATCATCCCGATGTCAATAAAGAGGACAAGGCACAGGAGAAGTTTATGAGGATAAAACACGCGTACAATACATTGATAAATTCTACTTCGCGCAGAAAATTTGATTCTGCAAATAGTGGTTCCGATTCTTATTATTCCTCTCAGAGAAGCGGAAGTGGTAATGCAAAAGAAGAAGAAGAATTTTACGGATTAGGTAATTTTTTGAGGGATGTTCAAATGACAATAGGGGAATTTTTCAAAGATCTTCAAGAAGAATTCAGGAACTGGGAAGCAAACTCTACTTCACAAGGAAAGCCGAAGAGCCTATGGGAGGAATTAGCAGAGATAGGAGAAGAATTTGTGGAGTTTCTGGAGAAAGAACTTAATATAGTTGATGCAGAAGTTGATTCGAATGATAGTTATAAAAAGCCTCAGGGAGAAAATCCTTCTCGTGCTTCTGCTGGCAGTGGTCCTCAAGATGAAGCTGGGAAGGGGAACAGCAGCATTAAGGATAACCTTGATGAAATAGAAGCTACTCTTGCTCAGTTAAAAAGGGAATTAGGTTTGTAG 876 0.4132 MYGFAPPLTGNNCLYCAKLCFRSLGPSWLLQNLANSSVPNSTFSYRREFNPLLFQSESGSPSCWNYKKHTRGSTLLKASRRESPYEVLGVSPSATADEIKKAYRKLALKYHPDVNKEDKAQEKFMRIKHAYNTLINSTSRRKFDSANSGSDSYYSSQRSGSGNAKEEEEFYGLGNFLRDVQMTIGEFFKDLQEEFRNWEANSTSQGKPKSLWEELAEIGEEFVEFLEKELNIVDAEVDSNDSYKKPQGENPSRASAGSGPQDEAGKGNSSIKDNLDEIEATLAQLKRELGL 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1241 291 SMART dnaj_3 82 139 IPR001623 -
Lele10g1241 291 MobiDBLite consensus disorder prediction 244 268 - -
Lele10g1241 291 PRINTS DnaJ domain signature 85 103 IPR001623 -
Lele10g1241 291 PRINTS DnaJ domain signature 103 118 IPR001623 -
Lele10g1241 291 PRINTS DnaJ domain signature 119 139 IPR001623 -
Lele10g1241 291 Gene3D DnaJ domain 80 205 IPR036869 -
Lele10g1241 291 ProSiteProfiles dnaJ domain profile. 83 147 IPR001623 -
Lele10g1241 291 ProSitePatterns Nt-dnaJ domain signature. 124 143 IPR018253 -
Lele10g1241 291 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 47 253 - -
Lele10g1241 291 CDD DnaJ 84 136 IPR001623 -
Lele10g1241 291 MobiDBLite consensus disorder prediction 142 165 - -
Lele10g1241 291 SUPERFAMILY Chaperone J-domain 71 143 IPR036869 -
Lele10g1241 291 Pfam DnaJ domain 84 144 IPR001623 -
Lele10g1241 291 MobiDBLite consensus disorder prediction 142 161 - -
Lele10g1241 291 MobiDBLite consensus disorder prediction 237 275 - -
Lele10g1241 291 Coils Coil 268 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1241 Lele-ChrLele10 23452281 23454795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g1241 79 148 C2H2 Transcription Factor Family AT1G74250 38.158 9.69e-08 51.2