Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1233 ATGGATCCAAATTTGCCTGCAGCTCGTGATTTCCTGAACGGACACAAAATAGATGATGGCACCGTCTTATCTGATACGAATCAATACCTAAATCTAGGAGATGAATGGAATCCTGACGAAAACCATCAGAACGTTCTTAATTTCTACCGTCATATTTTTCATCAACCTCATGTGGACCCACTTAGTTATGCTCCGCAGACAAGCTTGATTTCTGAAGGAGCACCGCCGGATCCACCTGTGGAAGGCGTGCCAGATGTCCCGTATTCAGCCGGGACTTCGGCTCCGGATCCTTCTCTGGAAGACTACGATTTTTCAGAAACCATCAAGTACATGAGCCAAGTTCTTATGGAAGAGAACTTGGAACAGAAGCCGTGCATGTTTTATGATCCACTCAGTCTAAAACTTACTGAGAAATCATTCTATGATGCTCTTCGATACAACGACACTCTCCCCCCTAATGAGCACCCTCTCCTTGACATTGTTGAGAGCCCCGATGGTAATTCCTCTGGAACTTCTACTGATTCTAGTACGGGCGGTGGCGGCACCAGCACCAGCACCAGCACCACCGACTCAGAATTAAGGCCCTCTTCGTCAGAGACCCCTGTTTTGAGGGATTATGCTTTCCAGTTCAAATCGCAATCCATATCTCAGCAATCCTCACAACCTTCAAATACTTCAACTACTATCAGTGATGGACTGCTGAATTTGGATTCTTCTATTACTCAGCTTTTGGCTCAAAATATCTTCAGTGATACAGAATCTGTCTCGCAATTCAATAGAGGCCTAGAGGAAGCTAGCAAATTTCTTCCTAAAGGAGCTCAACTCGTCACTGGTCTGCAGAGCACCACAGTGTCTGTACGGTCAAAGGGGATGGGAGAAAAGGCGGCGCGGAATATAGAGAAAGATGCTAAGGAGAATTTGCATGGGTTAAAGGGCAGAAAGAATCATGACCGTGATGATAGTGTTGATGAAGAAGAAGAAAGGAGAAGCAGCAAGCAGTCAGCAGTGTATGTTGATGAGAGTGATGAATTATCGGAGATGTTTGACAAAGTGTTGCTTAGTGTTGAGAATGTTCCATTATGTGCAGAGCACGAAAGCTTGCCCCATGGATCAACGAAAGACGTGCAGCCAAGTGAGCAGGCTGTGGAATCATCAGATGGAGGGAAGACGCGTTCTAAGAAACAAGGCAAGAAGAAGGAAACGGTGGATTTGAGGACACTTTTGGTTTTATGTGCTCAAGCTGTTTCTGCCAACGACAGCAGGACTGCTCATGAATTACTAAAGCAGATCAGGCAACATTCTTCACCCTTGGGGGATGCATCTCAGAGGGTGGCTCATTATTTCGCGAATGGCCTTGAGGCACGTTTGGTAGGTGGTGGTGCTGGAACCCAGCTATTTTATACTTCTCTGAGCTCCAAGAGGATCTCTGCTGCTGAAATTTTGAAGGCTTACCAAGTTTCAATATCTGCCTCACCTTTTAAGAAGTTTTCACATTTCTTTGCAATAAAAATGATTTTAAAAGCAGCTGAAAAGGCAGAAACCCTCCATATTGTTGATTTTGGTATCCTATATGGTTTCCAGTGGCCAATGCTTATCAAATTTCTTTCAAATAGAGCCGGTGGACCTCCCAAGCTACGCATCACCGGAATAGAATTTCCCCAACCTGGCTTTCGTCCGGCAGAAAGAATTGAGGAAACTGGTCGTCGTCTTGCTAATTATTGCAGTCGCTTTAATGTTCCCTTTGAGTACGAAGCTATAGCATCAAAAAACTGGGAAACCATCCAAATAGAAGACCTTAAGATTGAGAGGAATGAGTTCCTTGCTGTGAACTCTTTGCTGAGGTTCAAGAATTTACTGGACGATACAATTGAAGTGAATAGTCCTAGGAATGCAACTCTAAATCTGATAAGGAAGATGAAACCGGATCTCTTTATTCAATGCATTCTTAATGGATCCTACAATGCCCCTTTCTTTGTTACGCGGTTCAGGGAGGCACTGTTCCATTTCTCCGCGCTGTATGATATGTTTGATACTTTGGTACCCCGGGAAAACCAATGGAGGTTGTTGCTCGAGAAAGAACTTTACGGTCGGGAGGCCATGAACGTTGTGGCATGTGAAGGATTTGAAAGGGTTGAGAGGCCTGAGACATACAAACAATGGCAGGCAAGGGTTGCAAGGGCAGGTTTCAAGCAGCTGCCACTGAATAAGGAGCTTATGGCCAAGTTCAGGGAAAAGATGGAGGCATGGTACCATAAAGATTTTGTGTTTGATGTAGACAACAACTGGATGCTTCAGGGTTGGAAGGGACGCATTTTGTATGCTTCCACCTGTTGGGTTCCAGCATAA 2346 0.448 MDPNLPAARDFLNGHKIDDGTVLSDTNQYLNLGDEWNPDENHQNVLNFYRHIFHQPHVDPLSYAPQTSLISEGAPPDPPVEGVPDVPYSAGTSAPDPSLEDYDFSETIKYMSQVLMEENLEQKPCMFYDPLSLKLTEKSFYDALRYNDTLPPNEHPLLDIVESPDGNSSGTSTDSSTGGGGTSTSTSTTDSELRPSSSETPVLRDYAFQFKSQSISQQSSQPSNTSTTISDGLLNLDSSITQLLAQNIFSDTESVSQFNRGLEEASKFLPKGAQLVTGLQSTTVSVRSKGMGEKAARNIEKDAKENLHGLKGRKNHDRDDSVDEEEERRSSKQSAVYVDESDELSEMFDKVLLSVENVPLCAEHESLPHGSTKDVQPSEQAVESSDGGKTRSKKQGKKKETVDLRTLLVLCAQAVSANDSRTAHELLKQIRQHSSPLGDASQRVAHYFANGLEARLVGGGAGTQLFYTSLSSKRISAAEILKAYQVSISASPFKKFSHFFAIKMILKAAEKAETLHIVDFGILYGFQWPMLIKFLSNRAGGPPKLRITGIEFPQPGFRPAERIEETGRRLANYCSRFNVPFEYEAIASKNWETIQIEDLKIERNEFLAVNSLLRFKNLLDDTIEVNSPRNATLNLIRKMKPDLFIQCILNGSYNAPFFVTRFREALFHFSALYDMFDTLVPRENQWRLLLEKELYGREAMNVVACEGFERVERPETYKQWQARVARAGFKQLPLNKELMAKFREKMEAWYHKDFVFDVDNNWMLQGWKGRILYASTCWVPA 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1233 781 MobiDBLite consensus disorder prediction 293 336 - -
Lele10g1233 781 MobiDBLite consensus disorder prediction 287 341 - -
Lele10g1233 781 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 333 774 IPR005202 -
Lele10g1233 781 MobiDBLite consensus disorder prediction 164 198 - -
Lele10g1233 781 MobiDBLite consensus disorder prediction 365 398 - -
Lele10g1233 781 MobiDBLite consensus disorder prediction 151 199 - -
Lele10g1233 781 MobiDBLite consensus disorder prediction 371 385 - -
Lele10g1233 781 ProSiteProfiles GRAS family profile. 395 779 IPR005202 -
Lele10g1233 781 Pfam GRAS domain family 404 778 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1233 Lele-ChrLele10 23396357 23398702 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g1233 107 781 GRAS Transcription Factor Family AT1G07530 53.343 0.0 673
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele10g1233 GRAS 2.8e-109 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele31g1442 31 19913176 19914368 Lele10g1233 10 23396357 23398702 CCT
Lele10g1233 10 23396357 23398702 Lele11g1261 11 19557450 19560432 hybridization
Lele10g1233 10 23396357 23398702 Lele12g0061 12 555882 558233 hybridization