Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1223 ATGGGCAACGGCATATGCAAGTTGACCGTTTGTTTTACCGGCGGTGGGGGCCGTCATCGGAAGCAGGACATATCTTATTTGATAACTCAGCCTCTTGACGAGGGACTGGGCCACTCCTTCTGCTATGTTAGGCCCGACCCGACCCGTCTGTCGTCGTCCAAAGTCCACTGTGAGGAGACGACCACCTTCCGAACAATCTCCGGCGCATCTGTGAGTGCCAACACATCCACCCCTCTCTCCACAGCCTTCGTTGATTTGTACTCTTACGGTTGTATCGATAGAGCTGCAGCTTTCGAGAGTTCAACTTCTTTTGCTTCCCTTCCTCTGCAGCCAATCCCGAGAAATCTCATGAATTCCTGTCCCTTCTCGGGAAATATTGGTCTGATTCCTGGATCAGGTCCGCTTGAAAGAGGGTTTATGTCTGGTCCAATAGAGCGTGGATTTATGTCGGGTCCAATCGATCGGGGCTTGTTTTCGGGTCCGATGGAAAGGGGTAGTTCTGATCAATTTCAAAGAAGCTACTCTCACGGGGGTTTTGCGTTTAGACCCAGAACGCGAAAAGGCCGATGGATTCAAGCCCTTCAGAGGGCGATTTCAAAGACATTATCTCAGGGACAACACTCAATTGTCTCTTCTATCAAAGGGATTAAAGAACCGGAGTGGATTATCGAACCGGAGAGGCACAACGAGAATCTGATGGTAAGTAGTGTGAATTTCAGCAGCGATGGTAGCTTAGAAGATGATGATTCAATGGAAAGTCAAAATCTTCAATGGGCTCAAGGGAAAGCGGGTGAGGATAGAGTCCATGTTGTTGTATCAGAGGAGCACGGTTGGGTTTTCGTGGGGATATACGATGGTTTTAACGGTCCTGATGCTCCTGATTACCTTCTGTCCAATTTGTATGGTGCCCTTCATAAAGAATTGAAGGGACTATTATGGGACGACGGGTCTGAATCCTCCAACGCCACCCCCGACATGTCCGGTCTTCCGACGAACAATTCTAATTTGGAAGAGGAAGAATCGTTACAGAGCAGTGATCATGATGTTGGGAAGGATAGAATGGTAAATTCTTGTTCTCAATGTGTTGAGCAGGAGAACGATGCGTGCACAAGTGGAGATGCGAATATTGATAAGAGAAAGCGAGGTAAGAATGGTAAGTGCAAGTACAAAGGGGCAACGAAGAAATGGGAAGAGAATCATAGAAGGTGGAAGTGTGAATGGGATCGTGAAAGAGTAGAGCTTGATCGGAGATTAAAGGAACAGTTGAATCGATCTGGTTCTGGTGACTGCAACAACAGCCCAATAAATCATTCAGATGTATTGGAAGCTCTTTCGGAAGCTCTGAGAAAAACAGAGGAGTCTTACTTAGAAATTGCAGATAAGATGGTGATGGAAAATCCGGAGCTAGCTCTGATGGGTTCTTGTGTTCTTGTAATGTTAATGAAAGGAGAGGATGTTTATGTGATGAACGTCGGCGATAGCAGAGCCGTATTGGGTCAAAAGGCAGAGCCTGATTATTGGCTTGGCAAAATCAAGCAGGACTTGGAGAGAATCAATGAAGAAACAATGCATGATCTTGAATGTTTAGACGATGATAGATCAAATTTGGTGCCTAGCCTAAGCGCGTGTCAGCTAACCAAGGATCATTGTACCAACGTCGAAGAAGAAGTCCAGAGAGTACTGAGAGAACACCCAGATGATGCTTGTGCAATGTTAAACGAGCGTGTTAAGGGTTCCCTGAAGGTCACTCGAGCATTTGGTGCCGGATATCTCAAACAGCCGAAGTGGAACAATGCGCTTCTGGAGATGTTCAGAATAGACTATGTAGGAACTTCTCCATACATAACGTGCCTACCATACCTAAAGCATCACAGATTAGAGCCAAGGGACAAATTTTTGATACTATCATCCGATGGACTTTACCAATACTTGACAAACGAAGAAGCTGTGGCTGAAGTTGAGCTTTTCATCACGCTGCAACCCGAGGGAGACCCAGCTCAGCATTTGGTTGAAGAAGTTCTCTTCCGTGCTGCAAAGAAAGCTGGTTTGGATTTCCACGAGTTGCTGCAAATACCGCAGGGAGATAGGCGTCGTTACCACGATGATGTTTCTATCATTGTTATTTCTTTGGAGGGAAGGATATGGAGATCCTGTTTATAA 2160 0.4606 MGNGICKLTVCFTGGGGRHRKQDISYLITQPLDEGLGHSFCYVRPDPTRLSSSKVHCEETTTFRTISGASVSANTSTPLSTAFVDLYSYGCIDRAAAFESSTSFASLPLQPIPRNLMNSCPFSGNIGLIPGSGPLERGFMSGPIERGFMSGPIDRGLFSGPMERGSSDQFQRSYSHGGFAFRPRTRKGRWIQALQRAISKTLSQGQHSIVSSIKGIKEPEWIIEPERHNENLMVSSVNFSSDGSLEDDDSMESQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYGALHKELKGLLWDDGSESSNATPDMSGLPTNNSNLEEEESLQSSDHDVGKDRMVNSCSQCVEQENDACTSGDANIDKRKRGKNGKCKYKGATKKWEENHRRWKCEWDRERVELDRRLKEQLNRSGSGDCNNSPINHSDVLEALSEALRKTEESYLEIADKMVMENPELALMGSCVLVMLMKGEDVYVMNVGDSRAVLGQKAEPDYWLGKIKQDLERINEETMHDLECLDDDRSNLVPSLSACQLTKDHCTNVEEEVQRVLREHPDDACAMLNERVKGSLKVTRAFGAGYLKQPKWNNALLEMFRIDYVGTSPYITCLPYLKHHRLEPRDKFLILSSDGLYQYLTNEEAVAEVELFITLQPEGDPAQHLVEEVLFRAAKKAGLDFHELLQIPQGDRRRYHDDVSIIVISLEGRIWRSCL 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1223 719 SMART PP2C_4 249 708 IPR001932 -
Lele10g1223 719 CDD PP2Cc 436 710 IPR001932 -
Lele10g1223 719 Gene3D - 224 715 IPR036457 -
Lele10g1223 719 MobiDBLite consensus disorder prediction 315 349 - -
Lele10g1223 719 Pfam Protein phosphatase 2C 439 666 IPR001932 -
Lele10g1223 719 PANTHER PROTEIN PHOSPHATASE 2C 246 708 IPR015655 GO:0004722|GO:0006470
Lele10g1223 719 Coils Coil 512 532 - -
Lele10g1223 719 MobiDBLite consensus disorder prediction 316 339 - -
Lele10g1223 719 SUPERFAMILY PP2C-like 262 711 IPR036457 -
Lele10g1223 719 Coils Coil 441 461 - -
Lele10g1223 719 ProSiteProfiles PPM-type phosphatase domain profile. 248 710 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1223 Lele-ChrLele10 23334697 23337180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g1223 1 719 PP2C-type Phosphatase Gene Family AT2G28890 66.071 0.0 924