Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1212 ATGTCTTACCAAGGCAAGGGATTTTGGACGGTAAAGGCCACTGGACATATCAATGACAGAGAGACCGCATTTGATAATCCTTCTAAAATTGAATCAAAGCGAACTCATCAATGGTTTATTGATGCTGCTGAAGTAAATTTTTTTCCGAACAAGAAACAAGCAGTGGAAGATGAAAATGGAAAATCAGGTTCAGGAATTTCAAGTGTAAATTTTTCTCATTGGGAGAACAATCCTAATTTTAATTCAGTTCCTAAACAATTTATTGGCCAACTATTTGGGTCTGAATCTAAGCCTGTCAATTTTGAGGAAAAGAATAGTTCTTACGTTGTGGATGATAATTCTAATGTGAGGACCAAAATGATAAGCAATCAATGCAGAGAAGATTCATCTGAAGAAACTGAAGCGCGTCTTAGCTTTGATGGAATTAAAGTCAAAGTTAATCAGGTTAAGGACTCTGATAATGTACAGGCTGAAGGCAGACACAATTTGATCGGGCAGAATAACAGTGATCTACATCAGGCTTATAATGGTGAAGCTGCGATGGGCTATATGTCAATAGGGCAAGCTTTTGATAAAGGTAGCAATGTCCCTCTCATGGAACTTTCCTCCAACAGGGCGGATGCCCATGTTACATCATTGGGTGAGGTCTATGGTAATAATGCGGTATCAGTTGATGTTTCCTATAATAAAGAGGACACAAATACAATATCTTTTTGCGAGTTCCCAGATGAACAGGATATTATCCCTGTGGACAGGCCTTCTGGGGAATTTGGTCCTTTATATAATCTATCTTCGGTTCAAGTATCAACAACAGCTAATGAGAAAGAGTTGAATGCTTCAAATTCCAATGCAACTGCAAGTGTTCCCTGGGTGGATAAACTAAAGCCTGAACCTGTGTCCAAGAATAAACCAGAGCTCAAAGCAGCGAAGAAAGAAGCTCCAAACAGCTTCTCTTCTAGTGTCAGGAGCTTAATATCCACTGGTATGCTTGATGGCATTCCTGTAAAGTATGTCTCGGTTTCCCGGGAGGAACTTAGGGGAATTATAAAAGGTTCTGGCTATCTTTGTGGGTGCCAATCATGTAATTATTCCAAGGTTCTGAACGCTTACGAGTTTGAGAGACATGCTGGTTGCAAAACAAAACATCCAAACAATCACATTTATTTTGAGAACGGGAAGACCATCTATCAGATTGTACAGGAGCTGAGGAGTACCCCTGAAAGTTTGTTGTTTGATACAATCCAAACAGTTTTTGGGGCACCGATTAATCAGAAAGCGTTCTGCAGTTGGAAAGAATCTTTTCAAGCAGCCACACGTGAGCTTCAACGTATTTATGGAAAGAAAGAACTAAACATGAGTCACCAGCCTTGGACGAAATATTATTATGATTAA 1392 0.3951 MSYQGKGFWTVKATGHINDRETAFDNPSKIESKRTHQWFIDAAEVNFFPNKKQAVEDENGKSGSGISSVNFSHWENNPNFNSVPKQFIGQLFGSESKPVNFEEKNSSYVVDDNSNVRTKMISNQCREDSSEETEARLSFDGIKVKVNQVKDSDNVQAEGRHNLIGQNNSDLHQAYNGEAAMGYMSIGQAFDKGSNVPLMELSSNRADAHVTSLGEVYGNNAVSVDVSYNKEDTNTISFCEFPDEQDIIPVDRPSGEFGPLYNLSSVQVSTTANEKELNASNSNATASVPWVDKLKPEPVSKNKPELKAAKKEAPNSFSSSVRSLISTGMLDGIPVKYVSVSREELRGIIKGSGYLCGCQSCNYSKVLNAYEFERHAGCKTKHPNNHIYFENGKTIYQIVQELRSTPESLLFDTIQTVFGAPINQKAFCSWKESFQAATRELQRIYGKKELNMSHQPWTKYYYD 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1212 463 PANTHER AUTOIMMUNE REGULATOR 10 428 - -
Lele10g1212 463 Pfam Tify domain binding domain 347 402 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1212 Lele-ChrLele10 23251665 23254184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g1212 296 435 PHD Transcription Factor Family AT3G53680 51.773 1.03e-40 153