Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1204 ATGAAAGGAATGGACTTGCTCTGTTCTTCCCCTGCTTCCACTGCTGTAATCTCCGGCATGCACGCCCACCGTTCTACGGTACGCCGCCGTAGCCGCAAAAGCTGCGGCCTCCTTTCTCCTGTGCCTTGTTCGTGTTCTTCCCTTTCTCCCATTAACCCAAGGCCTTCTTACGAAGAGCACAGAAAGAGTTCTTCTGCAGACAAGCAAAACCATGACCTCGTCCGCCGCAAAAGCTACGTTAAACTCAACGACCTATATACTACTCACTGTAAAACTGCTTCTTCCTCAACGCACCTCCTCGCTGACTCTGATTCTTCTGTCATCCACAGGGATCACTCTCCTGCTCTGCCATCTTCTTCTTCTTCGCCTCGCTCTCGGCACCAGGTGAGGCATATTGATGAATCAAGTTGTGGTTCTGAGGGTGTCATTGCACTGCAAGGGCTGTGCGGCGAAAGTTGGAAAACACATTTCAAGAATGCAAGGAGTGACGTCATTCAGCATAGATATGGAAGCAAAGAAAGTAACAATTGTTGGAGACGTGACGCCAGTAGGTGTCCTGGCCAGTGTCTCCAAGGTGAAGAATGCACAGCTCTGGCCATCTTCTTTTTGAGCATCCTCGTCTGTTTTGAGGAAAACGATGAGCGAAGAGTAGACACTTTACAGTTGCAGGGTCAAATATGCCGGTGCCGTCAAAGTTTGCGTTTTGCTAAGTTGATCCCATCGCCTGCTTTCTTGCCGTCGTCTGCAGCTGCTGCTCCGCTATCAAAATTATATTTGAGCCCTCCCTTCTGTGGAGTTTCCTCACTCCTCACTCTTTTATCGTCACTCACCGCTGCTGTCTCCGTTGACCTCGACTCTTTAACTTTCAGTCTCCTGCAGGCTGTTGACCTCATATCAGCAGTGAAGGAGTTACATGGGCTTAGTTCTCAGGAACTTAATAGATTATTGAGGGACTCTGAAAATTTTACTATTCACTACCTAACCAGAAAAGGATCAACGAGCAAGATTGATATGGAAAAGCTTGCAGGATCTCTTCCATTGCATCTTATTGCAGTGCTAATGTCATCTGATAGGGATGAATCAATGATGAGATATGTGTTATGTGGTATACGCCTCTTAAATTCCTTGTGTGATTTATCTCCTCGTCACTCTAAGCTTGAACAGATTTTTCTAGATGATGTGAAAGTGTTGGAACAGTTGATTGACTTGGTTTTCTATGTGATAGTGGTTCTTGGTGGTTACAGACAGGAAGGCCATACTTTTAGTCTTAAACACCTTTTGCATTCGGCTCTTGTGGGATGCAGTTTACATCTATTAACTGGGTTTATATCAACGCAATGGCAAGATATTGTTCATGTATTGCTTGCGCACCCCAAGGTTGACATATTTATGGATGTGGCTTTTGGATCAGTTCGCATGGTTGTAAGGTTTCTTGAGATTACCCTGTCAGCTTACCATGAAGGCGACTTCATGGAACCAAATCTAACAGCTGAACGAGTAGTTTATTTTCTCACCCAGCAGTGTGAGGCTTCTTTACAGTTTCTTCAGTCATTGTGCCAGCAAAAATTGTTTAAGGAGCGCCTACTCAAGAATAAGGAACTATGTGGAAAGGGCAGTATTCTTTTTCTGATTAGGTCCATTCTGAAGTTAAACATTCAACCATATTTTCCAACCAGGATTATGGGTGCTTTGTCCCGGCTAAAATCTAAGATACTATCCCTTCTGCTGAGTTTGTGTGAAGCAGAAAACGCTTCTTATCTTGATGAAGTTGCCAGCTCATCACAAAGTTTAGATATGGCTAAGTCTGTTGCTTTAGAGGTTTTTGATGTGTTGAAGACTGCTTTTGGAAATAATCCTCAGAATCTCAAAATTGACAGAGACTACCCAATGGGGTTTTTACAGCTCAATGCAATGCGTCTAGCTGACATATTCTCTGATGATTCAAACTTTCGATCTTACATGACAATTTGTTTTACAAAAGTTCTGGCAGCAATATTTATGCTGTCCCATGGAGATTTTTTGTCCTGTTGGTGCTCGTCTAACCTCCCGGTGAAGGAGGAGGATGCAACTCTTGAATATGATATATTTGCTGCAGTTGGATGGATCTTGGATAATACTTCATCGCAGGATCTATTTAATACATCAAATTTGGAGTTTAACCTTGTCCGTAACAGCATGCCTCAGGCCTCTTACGCACATCATAGGACTTCATTATTTGTTAAAGTCATAGCAAATCTTCATTGTTTTGTTCCCAACATATGTGAAGAGCAGGAGAGGAACCTTTTCGTTCTTAAGGTTTTGGAGTGCTTGCAAATGGATTTAAGTAACTTGCTGCCCGGCTTTACTTTTGCTTCTGATGCTCCTAATGCAACCAGCATCTGCAAGAACCTACGCTCATTGTTAAGTCATGCAGAATCCTTGATCCCAAACTTTTTAAATGTGGAGGATGTGCATCTTTTAAGGGTGTTTTCAGACAAATTAGAGATATTAATTAATTCTTCTGGATTTAGAGTAAATCGTGTTCAAGATAGCAAGGACTTATCTTGTGACAAGTTTTCCAAACTTAACATCAATGAATATCAGGAGGCTCAGAGTCCAGGTGGATGCTCATCGCCTTTACCTGTAAAAGATCTTGCTGATCTTACGAAGAAGAGTGGTAATTTAAGGGAAGGAATGTCTGAGAATTCTGCATTCTTGGACATAAACCATTTTGATGCCAGAGCTGAAGACATTAATCAACGTGCTGGCCCAAATCCACAAGATAAGATGGAAGATAAAATTATTTCTGGTAAGACTGCATCAGAAGGTGCAAGAGATGCAGACAAGGATGCCCAAAATGTTGAAACAAGTGGTTCTGATACAAGTTCTGCTAAAGGTAAGAGTGTTATTGATCATATGGACAATGTTGAACTTTCAAAATCAGCCGAGCATCTTAAAAAGGTTGGAGTTGAAGAAAATCCAGAAGATGAGAAGGTTGAAACAAAGCAGCGGAAAAAGCGAAAGCGAACTATAATGAATGATAACCAGGTGATGTTAATTGAGAGGGCCTTGTTGGATGAGCCTGAGATGCAGCGAAATGCGGCTTTACTAATGTCCTGGTCTGAAAAATTAAGTCATCATGGTTCCGAAGTGACACCTTCACAGCTTAAAAATTGGCTGAATAATCGAAAAGCTAGGCTAGCCCGCACTGCTAGGGATGTTCGAGCAGTAGTAGATGTCGACACTTCAGCCCCTGACAAGCAAAAGGGGCCGGTACAGGGCTCCTATGACTCCCCTGATAGCCCAAGTGATGCATCAAATGCAAGAAAAGAACTTCCAAGTCACTCTAATATTAGTTCTGGTCAAAAGCCTGATTCTTTGATGGCTGAGTTTGTTGATCTTGGGCATCCAGAAGCTGGGTGCAAGACAGGTCAGTATGTCGTGCTTGTCGATAAGCAAGGAGAGGAAATTGCCAAAGGGAAAGTGTTTCAGGTTAGTGGCAAGTGGGGTGGGAAGAGTTTGGAGGAATTAGAGACATGTGTTGTGGATATCTGTGAGCTTAAAGCTGACAAAGGTTCGCGGCTACCTTACCCGTTGGAAGCCACCGGCTCCTCCTTTGCAGAGGCTGAAACCAAGTTAGGTGTCATGAGAGTGTTATGGGATGCAAACAGAATTTTCGTGTTGAGGCCTGGAGGTGATAAGAAGACTGACCCAAAGGCACAGGCCTTGAAGACTGCTAAGGCAGTAAAATCAGGCCCCACTTTCAAGAAAGCCAAGAAAATTAGAACATCAGTCACATTCCATCGACCCAAGACATTGAAAAAGGACAGAAATCCCAAGTACCCTCGTATCAGTGCTCCAGGAAGAAATAAGCTTGATCATTATCAAATTCTGAAGTATCCTCTCACCACTGAGTCGGCAATGAAGAAGATTGAAGACAACAACACTTTGGTTTTCATTGTTGACTTACGTGCAGACAAGAAGAAGATAAAGGATGCTGTGAAGAAGATGTATGACATTCAGGCCAAGAAAGTAAACACTTTGATTAGGCCCGACGGTACCAAGAAGGCCTATGTGAGGTTGACTCCCGATTATGATGCCTTGGATGTAGCAAACAAGATTGGCATCATCTAA 4113 0.4303 MKGMDLLCSSPASTAVISGMHAHRSTVRRRSRKSCGLLSPVPCSCSSLSPINPRPSYEEHRKSSSADKQNHDLVRRKSYVKLNDLYTTHCKTASSSTHLLADSDSSVIHRDHSPALPSSSSSPRSRHQVRHIDESSCGSEGVIALQGLCGESWKTHFKNARSDVIQHRYGSKESNNCWRRDASRCPGQCLQGEECTALAIFFLSILVCFEENDERRVDTLQLQGQICRCRQSLRFAKLIPSPAFLPSSAAAAPLSKLYLSPPFCGVSSLLTLLSSLTAAVSVDLDSLTFSLLQAVDLISAVKELHGLSSQELNRLLRDSENFTIHYLTRKGSTSKIDMEKLAGSLPLHLIAVLMSSDRDESMMRYVLCGIRLLNSLCDLSPRHSKLEQIFLDDVKVLEQLIDLVFYVIVVLGGYRQEGHTFSLKHLLHSALVGCSLHLLTGFISTQWQDIVHVLLAHPKVDIFMDVAFGSVRMVVRFLEITLSAYHEGDFMEPNLTAERVVYFLTQQCEASLQFLQSLCQQKLFKERLLKNKELCGKGSILFLIRSILKLNIQPYFPTRIMGALSRLKSKILSLLLSLCEAENASYLDEVASSSQSLDMAKSVALEVFDVLKTAFGNNPQNLKIDRDYPMGFLQLNAMRLADIFSDDSNFRSYMTICFTKVLAAIFMLSHGDFLSCWCSSNLPVKEEDATLEYDIFAAVGWILDNTSSQDLFNTSNLEFNLVRNSMPQASYAHHRTSLFVKVIANLHCFVPNICEEQERNLFVLKVLECLQMDLSNLLPGFTFASDAPNATSICKNLRSLLSHAESLIPNFLNVEDVHLLRVFSDKLEILINSSGFRVNRVQDSKDLSCDKFSKLNINEYQEAQSPGGCSSPLPVKDLADLTKKSGNLREGMSENSAFLDINHFDARAEDINQRAGPNPQDKMEDKIISGKTASEGARDADKDAQNVETSGSDTSSAKGKSVIDHMDNVELSKSAEHLKKVGVEENPEDEKVETKQRKKRKRTIMNDNQVMLIERALLDEPEMQRNAALLMSWSEKLSHHGSEVTPSQLKNWLNNRKARLARTARDVRAVVDVDTSAPDKQKGPVQGSYDSPDSPSDASNARKELPSHSNISSGQKPDSLMAEFVDLGHPEAGCKTGQYVVLVDKQGEEIAKGKVFQVSGKWGGKSLEELETCVVDICELKADKGSRLPYPLEATGSSFAEAETKLGVMRVLWDANRIFVLRPGGDKKTDPKAQALKTAKAVKSGPTFKKAKKIRTSVTFHRPKTLKKDRNPKYPRISAPGRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDLRADKKKIKDAVKKMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 1370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1204 1370 Gene3D - 1251 1370 IPR012677 -
Lele10g1204 1370 MobiDBLite consensus disorder prediction 1087 1116 - -
Lele10g1204 1370 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 1287 1363 IPR012678 GO:0003735|GO:0005840|GO:0006412
Lele10g1204 1370 FunFam 60S ribosomal protein L23a 1251 1370 - -
Lele10g1204 1370 SMART HOX_1 998 1067 IPR001356 GO:0003677
Lele10g1204 1370 MobiDBLite consensus disorder prediction 963 996 - -
Lele10g1204 1370 CDD homeodomain 999 1063 IPR001356 GO:0003677
Lele10g1204 1370 MobiDBLite consensus disorder prediction 930 946 - -
Lele10g1204 1370 MobiDBLite consensus disorder prediction 1071 1116 - -
Lele10g1204 1370 MobiDBLite consensus disorder prediction 947 961 - -
Lele10g1204 1370 ProSitePatterns Ribosomal protein L23 signature. 1348 1363 IPR001014 GO:0019843
Lele10g1204 1370 MobiDBLite consensus disorder prediction 108 133 - -
Lele10g1204 1370 MobiDBLite consensus disorder prediction 52 74 - -
Lele10g1204 1370 Hamap 50S ribosomal protein L23 [rplW]. 1290 1370 IPR013025 GO:0003735|GO:0005840|GO:0006412
Lele10g1204 1370 PANTHER NODULIN HOMEOBOX 292 1222 IPR039325 GO:0003697|GO:0009908
Lele10g1204 1370 ProSiteProfiles 'Homeobox' domain profile. 996 1063 IPR001356 GO:0003677
Lele10g1204 1370 Pfam Ribosomal protein L23 1290 1351 IPR013025 GO:0003735|GO:0005840|GO:0006412
Lele10g1204 1370 MobiDBLite consensus disorder prediction 55 74 - -
Lele10g1204 1370 MobiDBLite consensus disorder prediction 930 1003 - -
Lele10g1204 1370 Pfam Ribosomal protein L23, N-terminal domain 1232 1280 IPR005633 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1204 Lele-ChrLele10 23195379 23213951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g1204 1253 1370 Cytoplasmic Ribosomal Protein Gene Family AT3G55280 91.525 9.82e-60 199