Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1197 ATGGGTTTCTTCGACCTCAATATACCGTACATAGAACCCTCGCCGATTGACAAGGCCACTCTCGAAGGACAACGCACAAAGATTGTGGTCAAGGCTATGGAGTTGGGTTACACGGGAATTGCTTATAACCGTACTATCAAGGGTGTGATGTCTGATAGCCACCGTTGCTGCATTCCTCTCCTCACTCTCACGTCTCTCCTCAAGGTTGCTCCTTCTCTTTCCCTATCGGTTAAGCTCCACCGTGACCTTCTAGGAATCCCGTCGGCTGCCCCGTTCCGTCAGTATACGCGCCTTACTGTTTGCGTGGACAACTCATCGCAGGCTCAGGCGCTCAATTCGGGAAATCCCATTTTGAAGACCTACGATTTGGTGGCCGTTAGGCCATTGAATCAGACTGTGTTTGATCTAGCGTGTGAGAGAATGGAGGTAGATATCATTTCGATGGATTTCTCTGGCAAGTTGCCCTTTAGATTGAAGCAGCCTATGGTCAAAGCAGCAGTTGAGCGGGGGGTTTGTTTTGAAATTATTTACTCTGGTCTAATCACGGACACTCAAATAAGGAGACAGTTGATATGCAATGTTAAGTTGTTGGTGGATTGGACTCGAGGAAGAAACATCATATTATCAAGTGCTGCTCCTTCTGCTAATGAACTTAGAGGGCCTTATGATGTTGCTAATTTGTCCTCATTACTTGGGCTTTCCAAGGAGAAAGCTAAAGCAGCTATTTCTAAAAATTGTAGGACTCTTTTAACAAATTCTTTGAGGAAAAAGCAATATTACAAGGGGGCAATAAAAGTAGAAGTTGTAGCATCTGGTGCAGCATCTAAGTCTGAAGAAGCTTGGCATAAAGATTTACTTAAGTGGGATCCTATCTCCAGTGGTGAAGGTGATCTGCTGTTGGATGACATGGCCAAGTCATTTTCTTTATCTAGTAATGCATCAAAAACTACAAAAGCCATTGACTTTGCTTCTGCAATTGGCAGCATACCATCTCATGGTTTTCAACTCAGGGATTTCTTATCTGCTAGTAATTCTGCCCCTACCTTTCTTGATAATAATGATAATTCCCTGCATGTCACTGAAAAAGTAACTCCATCAACAGCTGTACTTGACAACCCAGCTGAGCAGCCAACCACTCTTGATATTTTTCCTGAGTCAGATGAAGGATTATCTGATGCTCCAACAATACATCATGCTTCTAGTTGTGACAATCTTCCACTGAAAAGTTGTACGAATGGCTCTTCTGAAGCTTTTAAAGTCACTAAAGAAATAAAGACTCCAACAAGTGGTACGAAGTTAGAGCTTAAATGTCTAGATTATTTAGATGAAAATCGAACCTCTTTAGAAGCAAAAGCACTTGAATTTCAGTCAGATAAATGCATCTCAAGTGTTGCATTGGATGGTATAATACCAGAGGAGAATGAGAAACTGGACACATCTTCAGCAGATGCCAAACTAGAAGACGCACACAATATTACTGGGATTGCCAAGATTCAGGAAGCTTTACCAAAGCAGGATATTGTAATAGGAGAAGTTACTACCTTGGAGATGAACCAATCTATATGCGAAACTTCAATGATGGATGAGCAATTTAAAAGACATGAATCTAAAGCAGTTGAACTTGGTGAGATGTCTGAAAAAACATCTCATGAGGTAAAATGGGAAGATGATTATTCCACTGCAACAGAAATAACCACAGATACGACTATGGAAGATCAGAAGCATGTGGAAGGTAGCATCCACTCTCATCAGCATGGCAAGGTCCAGTCTATGCCAGGTAGATCTAGAGTGAAGCGGGGGACAACGAACGGGATGCATCTTTCACCTTTCAAGCGATTATTGAATCCAATGCCTTTCAAGAAGAAAGCTCAGAAAATAAAAAGAACTAAGATGAGATAA 1899 0.4176 MGFFDLNIPYIEPSPIDKATLEGQRTKIVVKAMELGYTGIAYNRTIKGVMSDSHRCCIPLLTLTSLLKVAPSLSLSVKLHRDLLGIPSAAPFRQYTRLTVCVDNSSQAQALNSGNPILKTYDLVAVRPLNQTVFDLACERMEVDIISMDFSGKLPFRLKQPMVKAAVERGVCFEIIYSGLITDTQIRRQLICNVKLLVDWTRGRNIILSSAAPSANELRGPYDVANLSSLLGLSKEKAKAAISKNCRTLLTNSLRKKQYYKGAIKVEVVASGAASKSEEAWHKDLLKWDPISSGEGDLLLDDMAKSFSLSSNASKTTKAIDFASAIGSIPSHGFQLRDFLSASNSAPTFLDNNDNSLHVTEKVTPSTAVLDNPAEQPTTLDIFPESDEGLSDAPTIHHASSCDNLPLKSCTNGSSEAFKVTKEIKTPTSGTKLELKCLDYLDENRTSLEAKALEFQSDKCISSVALDGIIPEENEKLDTSSADAKLEDAHNITGIAKIQEALPKQDIVIGEVTTLEMNQSICETSMMDEQFKRHESKAVELGEMSEKTSHEVKWEDDYSTATEITTDTTMEDQKHVEGSIHSHQHGKVQSMPGRSRVKRGTTNGMHLSPFKRLLNPMPFKKKAQKIKRTKMR 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1197 632 PANTHER RIBONUCLEASE P SUBUNIT P30 1 494 IPR002738 GO:0008033
Lele10g1197 632 Gene3D - 90 253 - -
Lele10g1197 632 FunFam Polymerase/histidinol phosphatase-like protein 84 253 - -
Lele10g1197 632 Pfam RNase P subunit p30 4 245 IPR002738 GO:0008033
Lele10g1197 632 MobiDBLite consensus disorder prediction 577 610 - -
Lele10g1197 632 SUPERFAMILY PHP domain-like 26 250 IPR016195 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1197 Lele-ChrLele10 23131388 23134648 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g1197 10 23131388 23134648 Lele29g0181 29 1018552 1022318 CCT
Lele10g1197 10 23131388 23134648 Lele30g1226 30 14990167 14993869 CCT
Lele10g1197 10 23131388 23134648 Lele31g1372 31 19554612 19558379 CCT
Lele10g1197 10 23131388 23134648 Lele32g0170 32 983394 988508 CCT
Lele10g1197 10 23131388 23134648 Lele11g1222 11 19318727 19320237 hybridization
Lele10g1197 10 23131388 23134648 Lele12g0099 12 835490 838758 hybridization