Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1193 ATGGGAGTGATGGTTATAGTGGTGGATGTTGATGGAAGTAGAAGTTCAGGTCACGGGGCCTCAGGGGTCCCTCTTCACAGAAAATCTGCCACCCAATCTGAATTGCAAAATAAGGTCCTCAAGAACAACCATGAAGTCATTTCTAGAATATCATCTTCTCCTTCATTTCCCTCTCTCTTCCTATATATCCTCCTCCCTTTCTGCCCTTTTTCTCTGGAAAAAAAAAACCCCTTCCATCATCTCATCGCCATCACCGTCAGGGGAGAGATGGAGCAATCAGAAAAACCAGCAAAGCAATCATCACAAGGGTCGTCATTTCCGAGGGACCCTCGTGGTTCGCTAGAAGTGTTCAATCCTTCTTCCTACTCAACGGACAGTCCATCAGACTCGCCGTTCCGATCTCAGCCAAAGTGGAAAACTTGGATCGAGTCACCAACAGCCACCGCCACCAACAAGGATGAAATCACCAGCACATCATGGATGGCCCTCAAGGACTCCGATGGTTCGCCGCCGCAGACTCTGTCCGCTATTCTCAACGAGCTACCTGAGCTGACACCGAAATCTCCGTCCGCCGTGAATTTCGCTGGAGACTTAGGTACGGCAGCGCAGAGAGCCGCTGAGTGGGGATTGGTGCTGAAGACTGACACCGAGACGGGCAAGCCGCAAGGAGTGGCTGTGAGAAACTCGGGAGGGGAAGAACCAAATTCGAAGATCTCCGGTACGTCGAGAAGGAACTCAAACAACTCGGTGAGAAGCTCCGGCGAATCGTCGGACGACGGAGGAAAAGAAATACGGGGATTCCCGAGAGTTTCAGAGGATCTGAAGGATGCTCTGTCGATGTTCCAACAGACTTTCGTGGTCTCGGATGCGACCAAACCCGATTATCCGATCATGTACGCGAGTGCCGGATTCTTTAAGATGACGGGTTATACTTCCAAGGAGGTCGTCGGGAGGAACTGTCGGTTTTTACAGGGAGCGGATACGGATCCAGAGGACGTGGCAAAGATAAGGGAGGCGCTGCAGGCAGGGACGAGTTACTGCGGAAGATTACTGAATTACAAGAAGGATGGCACTCCTTTCTGGAACCTTCTCACTATATCCCCCATCAAAGACGACGATGGCAAAGTCCTCAAATTTATTGGAATGCAAGTGGAGGTTAGCAAGCACACGGAGGGGTCCAAGGAGAAAACGCTTCGCCCTAATGGATTGCCCGAATCTTTGATTCGATATGATGCTCGTCAAAAAGAGAAGGCTTCCTCCGTAGTAACTGAGTTAGTGAAGGCAGTGAAGCGGCCCCGATCATTAAGTGAATCAGGAAAGCGTCCATTGATCAGAAAATCTCTAGGTGATGAAGAACAAAGAGTAGAAAGTTTGCCAAGGAGGAAATCAGAGAGCGTTGCTGCATTACGACCAAAACCACATGGAGGGCATCGAAATTCAATGCAGCAAATCAATGAGCTACCTGAAAAGAAGCAGAAAATTCGCCGTCGTTCTTTCATGGGGTTCATTAAGAAAAGTCAGCCCAGTGAGGAAAGCATTGAGGACAATGAAGTTGTGGAGGGCAGCTCAGAGTGTGAGGAAGAAGACGAGAGGCCCGATAGCATTGATGACTGCAAACTAGCGCAAAGGGAGAAGCGAAAGGGTCTTGATCTTGCGACGACACTTGAACGTATAGAGAAGAACTTTGTCATTACAGATCCAAGACTGCCTGATAATCCCATCATCTTTGCATCTGATAGTTTCCTAGAACTTACAGAGTACAGTCGTGAAGAAATTTTGGGAAGAAATTGCAGGTTTTTGCAAGGACCTGAAACTGATACAGCAACTGTGAGAAAAATTAGAGAGGCAATTGACAACCAAAAAGAAGTTACGGTGCAGCTGATTAATTATACAAAGAGTGGCAAAAAGTTCTGGAACCTGTTTCATCTGCAACCTATGCGTGATCAGAAGGGAGAAGTACAGTATTTCATTGGGGTTCAACTTGATGGTAGCCAGCATGTGGAACCTCTTCATAACCGTATTGCAGAAGACACGGCAAAGGAGGGAGAACAATTGGTTAAAAACACTGCAGAAAATGTTGATGAGGCAGTGAGAGAACTTCCAGATGCCAATTTGAAACCAGAAGATTTATGGTTAAATCACTCAAAAGTGGTTCATCCAAAACCTCATAGGAAGGATAACCCTGCTTGGGGAGCTATCCTGAAGATCCTAAAAAGTGGAGAACGGATAGGCTTGAAGCATTTTAGGCCAGTCAAACCTTTGGGATCTGGGGACACTGGCAGTGTGCATTTGGTGGAGCTATGTGGAACTGGCCAATATTTTGCCATGAAGGCTATGGATAAGGGTGTTATGCTAAATCGCAACAAGGTGCATAGAGCTTGCACAGAGAGAGAAATCCTCGACATGTTGGACCATCCTTTTCTGCCCGCATTATACGCTTCTTTTCAGACCAAAACGCACATTTGCCTGATAACTGATTATTGTCCCGGTGGAGAACTGTTCCTGCTTCTCGACCGGCAGCCAACAAAAGTTATCAAAGAAGATGCAGCAAGGTTTTACGCTGCTGAGGTTGTGGTTGCGTTGGAGTACCTACATTGTCAAGGAATAATATATCGAGATTTGAAGCCAGAAAATGTGTTACTCCAGAGTAATGGGCATGTGTCTCTGACAGATTTTGACTTGTCATGTTTAACATCCAGCAAACCACAGCTTTTGATGCCACCTGCAAATGAAAAGAAGAAACAGAAAGGACAGCAGGCTCCAATATTTGTGGCCGAACCAATGAGAGCGTCAAATTCTTTTGTTGGCACTGAAGAGTACATAGCTCCGGAAATTATAACTGGTTCAGGCCATACTAGTGCTGTGGATTGGTGGGCTCTTGGTGTTCTTCTATACGAAATGATGTATGGATACACACCATTCAGGGGGAAGACAAGGCAAAAAACATTTGCTAATATTCTTCACAAGGATCTTAAATTTCCCAAAAGTAAACCGGTAAGTCTCCATGCCAAGCAGTTGATTCACCGGTTGCTGCACAGAGATCCCAAGAACCGATTGGGGTCACAGGAAGGAGCAAACGAAATAAAGTGTCACCCATTCTTCAAAGGTGTCAATTGGGCCCTCGTTCGTACTATGAGCCCTCCTGACCTGGACGCTCCTCTCTTCGGGGCAACTGAAGAAGAGAAGGAAGTCAGAATTGTTGATCCTGCCCTGGAGGAACTACAAACAGATTTTTTCTGA 3240 0.4664 MGVMVIVVDVDGSRSSGHGASGVPLHRKSATQSELQNKVLKNNHEVISRISSSPSFPSLFLYILLPFCPFSLEKKNPFHHLIAITVRGEMEQSEKPAKQSSQGSSFPRDPRGSLEVFNPSSYSTDSPSDSPFRSQPKWKTWIESPTATATNKDEITSTSWMALKDSDGSPPQTLSAILNELPELTPKSPSAVNFAGDLGTAAQRAAEWGLVLKTDTETGKPQGVAVRNSGGEEPNSKISGTSRRNSNNSVRSSGESSDDGGKEIRGFPRVSEDLKDALSMFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGADTDPEDVAKIREALQAGTSYCGRLLNYKKDGTPFWNLLTISPIKDDDGKVLKFIGMQVEVSKHTEGSKEKTLRPNGLPESLIRYDARQKEKASSVVTELVKAVKRPRSLSESGKRPLIRKSLGDEEQRVESLPRRKSESVAALRPKPHGGHRNSMQQINELPEKKQKIRRRSFMGFIKKSQPSEESIEDNEVVEGSSECEEEDERPDSIDDCKLAQREKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDTATVRKIREAIDNQKEVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLHNRIAEDTAKEGEQLVKNTAENVDEAVRELPDANLKPEDLWLNHSKVVHPKPHRKDNPAWGAILKILKSGERIGLKHFRPVKPLGSGDTGSVHLVELCGTGQYFAMKAMDKGVMLNRNKVHRACTEREILDMLDHPFLPALYASFQTKTHICLITDYCPGGELFLLLDRQPTKVIKEDAARFYAAEVVVALEYLHCQGIIYRDLKPENVLLQSNGHVSLTDFDLSCLTSSKPQLLMPPANEKKKQKGQQAPIFVAEPMRASNSFVGTEEYIAPEIITGSGHTSAVDWWALGVLLYEMMYGYTPFRGKTRQKTFANILHKDLKFPKSKPVSLHAKQLIHRLLHRDPKNRLGSQEGANEIKCHPFFKGVNWALVRTMSPPDLDAPLFGATEEEKEVRIVDPALEELQTDFF 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1193 1079 ProSiteProfiles Protein kinase domain profile. 748 1034 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g1193 1079 ProSiteProfiles PAC domain profile. 344 398 IPR000700 -
Lele10g1193 1079 ProSitePatterns Serine/Threonine protein kinases active-site signature. 869 881 IPR008271 GO:0004672|GO:0006468
Lele10g1193 1079 FunFam Putative LOV domain-containing protein 832 1046 - -
Lele10g1193 1079 TIGRFAM sensory_box: PAS domain S-box protein 572 662 IPR000014 -
Lele10g1193 1079 TIGRFAM sensory_box: PAS domain S-box protein 297 390 IPR000014 -
Lele10g1193 1079 Gene3D PAS domain 536 700 - -
Lele10g1193 1079 SMART serkin_6 748 1034 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g1193 1079 Pfam Protein kinase domain 751 1034 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g1193 1079 PANTHER FLIPPASE KINASE 1-RELATED 640 1052 - -
Lele10g1193 1079 Gene3D PAS domain 284 457 - -
Lele10g1193 1079 Pfam PAS domain 570 662 IPR000014 -
Lele10g1193 1079 Pfam PAS domain 291 387 IPR000014 -
Lele10g1193 1079 SMART pas_2 549 618 IPR000014 -
Lele10g1193 1079 SMART pas_2 272 341 IPR000014 -
Lele10g1193 1079 MobiDBLite consensus disorder prediction 513 533 - -
Lele10g1193 1079 FunFam LOV domain-containing protein 747 831 - -
Lele10g1193 1079 FunFam LOV domain-containing protein 536 700 - -
Lele10g1193 1079 FunFam Putative LOV domain-containing protein 284 440 - -
Lele10g1193 1079 SMART pac_2 624 666 IPR001610 -
Lele10g1193 1079 SMART pac_2 347 389 IPR001610 -
Lele10g1193 1079 CDD PAS 297 386 IPR000014 -
Lele10g1193 1079 CDD PAS 562 662 IPR000014 -
Lele10g1193 1079 Gene3D Phosphorylase Kinase; domain 1 747 831 - -
Lele10g1193 1079 Gene3D Transferase(Phosphotransferase) domain 1 832 1045 - -
Lele10g1193 1079 SUPERFAMILY Protein kinase-like (PK-like) 732 1053 IPR011009 -
Lele10g1193 1079 ProSiteProfiles PAS repeat profile. 547 620 IPR000014 -
Lele10g1193 1079 MobiDBLite consensus disorder prediction 430 468 - -
Lele10g1193 1079 MobiDBLite consensus disorder prediction 505 535 - -
Lele10g1193 1079 MobiDBLite consensus disorder prediction 213 266 - -
Lele10g1193 1079 MobiDBLite consensus disorder prediction 232 255 - -
Lele10g1193 1079 MobiDBLite consensus disorder prediction 92 137 - -
Lele10g1193 1079 ProSiteProfiles PAS repeat profile. 270 341 IPR000014 -
Lele10g1193 1079 Coils Coil 679 699 - -
Lele10g1193 1079 CDD STKc_phototropin_like 746 1053 - -
Lele10g1193 1079 MobiDBLite consensus disorder prediction 116 137 - -
Lele10g1193 1079 SUPERFAMILY PYP-like sensor domain (PAS domain) 291 383 IPR035965 -
Lele10g1193 1079 ProSiteProfiles PAC domain profile. 621 675 IPR000700 -
Lele10g1193 1079 SUPERFAMILY PYP-like sensor domain (PAS domain) 563 662 IPR035965 -
Lele10g1193 1079 MobiDBLite consensus disorder prediction 430 491 - -
Lele10g1193 1079 ProSitePatterns Protein kinases ATP-binding region signature. 754 777 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1193 Lele-ChrLele10 23109182 23122785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g1193 90 1079 AGC Kinase Gene Family AT3G45780 70.490 0.0 1370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele10g1193 Pkinase 3.1e-65 CL0016