Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1191 ATGTGGAAGTGCGGTACGCGACTAAGCGGGGTTATGGGTTGCTTTTGTTTTGCAAAGAAATCAAGCAGAAAATCTCAGGCCAACAACCACAGCCAGAGCGCGAAGCCGAGCAATCACACGGTTGCTGATAAAGTGCAATTTGATTCGAATGTAAATGCGGCGAAGGAAGCTCAGTCTAAGGATGATCAACTTTCCTTGGACGTGAAGAGATTGAATTTAACGGACAATGGAGCCACTACTGGTAGCACAGCGCAGACTTTTTCTTTCGATGAACTTGCAGCAGCAACAGGAAATTTTAGGTCAGATTGCTTCCTGGGAGAAGGAGGGTTTGGCAAGGTTTACAAGGGGCATTTGCAGAGAATAGACCAGGTTGTGGCTATAAAGCAACTTGACCCTAATGGACTTCAAGGAATTCGGGAATTCGTTGTTGAAGTTTTGACACTTAGTCTAGCAGACCACCCTAATCTTGTGAAATTGATTGGGTTTTGTGCTGAAGGAGATCAGAGACTATTGAATCACCATTGCATTGCTTATCTTGATATTCTCCATTCCTTCTCAGATCTTCCACCCGGTAGAAAACCACTTGATTGGAATACGAGAATGAAAATAGCAGCTGGAGCTGCAAAGGGCTTGGAGTATTTACATGAGAAAATGAAGCCTCCTGTCATATACCGCGATTTGAAATGCTCAAACATTTTATTAGGTGAGGGATATCATCCTAAGTTATCTGATTTCGGCTTGGCCAAAGTGGGCCCAAGTGGCGATAAGACACATGTTTCAACAAGGGTTATGGGTACATATGGTTACTGTGCTCCGGATTATGCCATGACGGGTCAGTTAACGTTCAAGTCAGACATCTACAGCTTTGGAGTTGTTCTTTTGGAGCTCATCACAGGCAGGAAAGCCATTGATAACACTAGACCTGCCAAAGAACAAAATCTGGTTGCATGGGCAAGGCCGTTATTCAAAGACAGGAGAAAATTCTCCCACATGGTAGACCCATTGCTCGAAGGCCAATATCCTGTGAGAGGTTTGTACCAAGCTCTAGCTATTTCTGCCATGTGTGTTCAAGAGCAACCTAATATGCGGCCAGGGATAACCGACGTGGTTACCGCGTTAAACTACCTCGCCTCCCAGAGATACGATCCCCAAATTCATCAAGTACAGAACTCCAAAAGAAGGGATGGTGATCAAAGCCATCATATGCAGCAAAGGACCTCAAGTGCGAATTCTCGCGGCTCTGGCGAGCACAGAGCCATCAACGTCGCTGATCCTCCACAAAGAAAGCGAAGAAGAACAGAAGGTAATGATACGTCCGGCCTTCCACTTTATGATACGCGGAGCACCGATGGAAAGAGGGTGGTTTCCTTGTCACGATCTGCAGAGAAATGGCTTCACGCTATTCCTTTTATTCTGCTGCTTTGCCTTTTCCTCCTTTGGTTGAATTACTTTCCAGTGAATGTGACAGTTAGAGATGGTAGAACTACATTCATACGTCAGATTCATGCACCGCTGCCTAACACTACGTATATTGCTCTCACCATACTAGCAGCGTCTGCAACACCAATCTCGTCATTTCCTGAAAATCTGTCGTACGACAATGAAACTTCCTTGCATTTGAATACAAGCCAAAACAAACTAGCATTACTGATATGCTTTGTTGGATTTACAAGGCGGAAATGGATAAAAATATGCAAAAATCTGGTTTGA 1710 0.445 MWKCGTRLSGVMGCFCFAKKSSRKSQANNHSQSAKPSNHTVADKVQFDSNVNAAKEAQSKDDQLSLDVKRLNLTDNGATTGSTAQTFSFDELAAATGNFRSDCFLGEGGFGKVYKGHLQRIDQVVAIKQLDPNGLQGIREFVVEVLTLSLADHPNLVKLIGFCAEGDQRLLNHHCIAYLDILHSFSDLPPGRKPLDWNTRMKIAAGAAKGLEYLHEKMKPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNTRPAKEQNLVAWARPLFKDRRKFSHMVDPLLEGQYPVRGLYQALAISAMCVQEQPNMRPGITDVVTALNYLASQRYDPQIHQVQNSKRRDGDQSHHMQQRTSSANSRGSGEHRAINVADPPQRKRRRTEGNDTSGLPLYDTRSTDGKRVVSLSRSAEKWLHAIPFILLLCLFLLWLNYFPVNVTVRDGRTTFIRQIHAPLPNTTYIALTILAASATPISSFPENLSYDNETSLHLNTSQNKLALLICFVGFTRRKWIKICKNLV 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1191 569 PANTHER OS07G0668900 PROTEIN 16 387 - -
Lele10g1191 569 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Lele10g1191 569 ProSiteProfiles Protein kinase domain profile. 99 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g1191 569 SMART serkin_6 99 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g1191 569 ProSitePatterns Protein kinases ATP-binding region signature. 105 128 IPR017441 GO:0005524
Lele10g1191 569 MobiDBLite consensus disorder prediction 384 445 - -
Lele10g1191 569 FunFam Serine/threonine-protein kinase PBS1 179 391 - -
Lele10g1191 569 FunFam probable serine/threonine-protein kinase RLCKVII 72 175 - -
Lele10g1191 569 Gene3D Transferase(Phosphotransferase) domain 1 180 401 - -
Lele10g1191 569 MobiDBLite consensus disorder prediction 422 436 - -
Lele10g1191 569 MobiDBLite consensus disorder prediction 387 401 - -
Lele10g1191 569 SUPERFAMILY Protein kinase-like (PK-like) 85 390 IPR011009 -
Lele10g1191 569 Gene3D Phosphorylase Kinase; domain 1 70 173 - -
Lele10g1191 569 Pfam Protein kinase domain 104 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1191 Lele-ChrLele10 23100944 23106285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g1191 12 378 Glycoside Hydrolase AT3G07070 53.639 1.33e-135 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lele10g1191 Pkinase 5.7e-37 CL0016