Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1189 ATGTGTTTGGGCCGGCCCAAAGTATTTGAGTTCCATACGAGCCCATCAATTCTTTGCCGAGTAGGTTTAGAAAGCCCATCTGTGACATGGGCTGCTGGGGCTTGTGTATTTGCTGGCTGTGCGATGAATTCTGAGACTAAGGAAGAGGTTGCGATTAAGCAGATAGGGAATGCATTCGACAACATGATCGACGCCAAGAGGACACTTCGTGAAATCAAGCTTCTCTGTCATATGGATCATGATAATGTGAGCGTATGCTTGGTTTTTCTGCCTCTGTATATGAGACTCTACGTTGCTATATTGTTTGAAAAAAAAAAATTGTTGATTGCTCCTGAACTTTGTATATGCTATGTCTTTTACATGACTCTCTTCAATGGTATTGTTCAGATTATTAAAATTAAGGATATCATACGGCCGCCTGAGAGGCAAAAGTTTAATGATGTTTACATTGTGTATGAATTGATGGATACTGACCTACATCAGATCATTCGCTCTCCCCAGGATCTGGCAGATGAGCATTGTCAACTCTTGAGAGGATTGAAGTACATACACTCTGCAAATGTGTTGCACCGAGATTTAAAACCAAGCAACTTACTCCTCAACGCAAACTGTGATCTCAAGATCTGCGACTTTGGGCTAGCCAGAACTACTTCTGAGACAGACTTTATGACAGAATATGTCGTGACTCGTTGGTATAGGGCCCCTGAATTGCTATTGAATTGTGCAGAATATACTGCAGCTATTGATATATGGTCCGTTGGTTGCATTTTGATGGAGATAATTATAAGGGAGCCTCTATTTCCCGGCAAAGACTATGTTCATCAGTTGACGCTGATAACAGAGCTCCCACATGTAGAAAAGCAACCCTTTGCATCCAGGTTTCCTGAAGTGTCACTGTTGGTAATTGATCTGGCGGAGAAAATGCTGGTTTTTGATCCGTCCAAACGCATAACCGTGGAAGAAGCATTGAATCACCCGTATTTGTCAAGTCTTCATGAGATCAACGAGGAGCCAATTTGCCCAACTCCTTTCATCTTTGACTTCGAGAAGACAACTTTAAGCGAAGATGATATAAAGGATCTCATATGGAGGGAGTCTCTAAACTTTCCCCCAGATGAGATGGTCGAATAG 1131 0.4218 MCLGRPKVFEFHTSPSILCRVGLESPSVTWAAGACVFAGCAMNSETKEEVAIKQIGNAFDNMIDAKRTLREIKLLCHMDHDNVSVCLVFLPLYMRLYVAILFEKKKLLIAPELCICYVFYMTLFNGIVQIIKIKDIIRPPERQKFNDVYIVYELMDTDLHQIIRSPQDLADEHCQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAPELLLNCAEYTAAIDIWSVGCILMEIIIREPLFPGKDYVHQLTLITELPHVEKQPFASRFPEVSLLVIDLAEKMLVFDPSKRITVEEALNHPYLSSLHEINEEPICPTPFIFDFEKTTLSEDDIKDLIWRESLNFPPDEMVE 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1189 376 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Lele10g1189 376 FunFam Mitogen-activated protein kinase 155 281 - -
Lele10g1189 376 Gene3D Phosphorylase Kinase; domain 1 30 112 - -
Lele10g1189 376 Gene3D Phosphorylase Kinase; domain 1 129 154 - -
Lele10g1189 376 Gene3D Transferase(Phosphotransferase) domain 1 282 342 - -
Lele10g1189 376 Gene3D Transferase(Phosphotransferase) domain 1 155 281 - -
Lele10g1189 376 SUPERFAMILY Protein kinase-like (PK-like) 40 334 IPR011009 -
Lele10g1189 376 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 40 329 - -
Lele10g1189 376 ProSiteProfiles Protein kinase domain profile. 15 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g1189 376 SMART serkin_6 24 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g1189 376 Pfam Protein kinase domain 129 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g1189 376 Gene3D Phosphorylase Kinase; domain 1 343 366 - -
Lele10g1189 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1189 Lele-ChrLele10 23085776 23088296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g1189 31 369 MAP Kinase Gene Family AT1G07880 61.957 1.23e-155 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lele10g1189 Pkinase 6.5e-52 CL0016