Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1188 ATGTTCGATCTTAACCTGAATGCCGATTCGACTGATACCTCTTATAATGATGAATCCATCAGGTTCTCCGACGAGCTAACGGAAGCCTCCGGGAATCAAATGGCGAAATCTGGGACTTCCAATTCCTCTAATTTCTGTGCTGACGGGTCCAGCAATGGAGGAGATGAGGACTCCTGCTCTACACGCGGTGGAGACTCCTTCACCTTTAATTTCGATATCCTTAAGGAAGATAGCGCGAAAGAAGTCGCAACCAAGGAGCTACTTCTGTTTAGTGAAACTAAAGGAGTGGACGGTGAGTCTGCGAATTGGCAGGGTCAGTCTTTGTCTGCCCTTCCATCGATAAAGAGCTGGATGAGTCTTTCCTTTGATCATCAGGGTGGTAACGGAGAGATGAAGATGGTCCAGGTTCAGCAGCAACCTCAACAGCAAGTGAAGAAAAACAGAAGGGGTCCAAGGTCTCGGAGCTCGCAGTACCGAGGGGTCACGTTTTACAGGAGGACTGGAAGATGGGAATCGCATATCTGGGATTGCGGGAAGCAAGTCTATTTGGGTGGGTTTGATACCGCCCATGCCGCTGCCAGAGCCTACGATCGTGCTGCTATTAAGTTTAGGGGAGTCGATGCTGACATCAATTTCAATCTCAATGATTACGAGGTGGATCTTAAGCAGATACGTTCTCAATGTTTTCCCCCCTTACTTTTCCGAATTTGGAGATGCATACCTAAGATGCCTGTTTCAATGAGACGATTGGCAAAGGTTTTTCGTTATAGAGATTGCAATGCTTTCGTGCAGGTCGTTAGGATTCCATCCAACATTTCTCTCCCTTTTGATTTTCTGGAACTCAGGGCTTATGATAAGGCAGCTATCAAATGCAACGGAAGGGAGGCAGTGACCAATTTTGAATTAAGAACATACGAAGGAGAGATGAAGCCAGAGGTCATTACTGAAGGTGGCAGCCACAATCTTGACCTCAATTTGGGCATAGCAACACCAGGCAGTGGTCCAGAAGAAAATAGGGGCCATCAGTTACAACCTATCCCATACAACCTGCATACTGGAAGAAGTTCAAGGAAGGAGATCAATGTAAGGCCAGTTGTTACTGAGGAGCGTCCATTTGTATGGAATGGCATCTATCCTAGTTTCTTTCCCAATGAGGTGAATTTCATTGTCTGGTATATAGATGTACAATCAGAGTATCATACTTGTATTATCTCAGAAAGGGTTGAGAGAATCAGTGGAGATCATCCACAGGGACTGCCTTTGCCTCAATGGGGTTGGCAAACGCAACGCCAGGTTACTGCGACGCCAGTACCACCGTTCTCTACTGCAGCATCATCAGGATTCTCTCCGGCTACCTTTCCATTGGCTACCATCTTTCCACCAAAATCTTTGAGCTTGAGCTCAATTCGCCATAATAATATCTGTTTTGATCCATCTAGGGCAGCTGGAAGCAACACAACTCAACATTGCCAGATGAAGTCCCCGCAAGCACCCCACTAG 1500 0.4653 MFDLNLNADSTDTSYNDESIRFSDELTEASGNQMAKSGTSNSSNFCADGSSNGGDEDSCSTRGGDSFTFNFDILKEDSAKEVATKELLLFSETKGVDGESANWQGQSLSALPSIKSWMSLSFDHQGGNGEMKMVQVQQQPQQQVKKNRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNLNDYEVDLKQIRSQCFPPLLFRIWRCIPKMPVSMRRLAKVFRYRDCNAFVQVVRIPSNISLPFDFLELRAYDKAAIKCNGREAVTNFELRTYEGEMKPEVITEGGSHNLDLNLGIATPGSGPEENRGHQLQPIPYNLHTGRSSRKEINVRPVVTEERPFVWNGIYPSFFPNEVNFIVWYIDVQSEYHTCIISERVERISGDHPQGLPLPQWGWQTQRQVTATPVPPFSTAASSGFSPATFPLATIFPPKSLSLSSIRHNNICFDPSRAAGSNTTQHCQMKSPQAPH 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1188 499 Pfam AP2 domain 157 205 IPR001471 GO:0003700|GO:0006355
Lele10g1188 499 SUPERFAMILY DNA-binding domain 156 214 IPR016177 GO:0003677
Lele10g1188 499 CDD AP2 156 212 IPR001471 GO:0003700|GO:0006355
Lele10g1188 499 FunFam AP2-like ethylene-responsive transcription factor 156 215 - -
Lele10g1188 499 MobiDBLite consensus disorder prediction 29 60 - -
Lele10g1188 499 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 282 339 - -
Lele10g1188 499 SMART rav1_2 157 219 IPR001471 GO:0003700|GO:0006355
Lele10g1188 499 ProSiteProfiles AP2/ERF domain profile. 157 213 IPR001471 GO:0003700|GO:0006355
Lele10g1188 499 Gene3D AP2/ERF domain 156 215 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1188 Lele-ChrLele10 23038831 23042397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g1188 1 466 AP2-EREBP Transcription Factor Family AT5G60120 37.067 9.80e-56 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele10g1188 AP2 7.3e-10 CL0081