Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1186 ATGGTCCGAATTGCGTGGCACTCGGCTGGTACCTATGACGTGAAGACCAAGACCGGTGGTCCCTTCGGTACCATGAAGCAACCTGCTGAACTTGCTCACGGGGCTAACAACGGGCTTGATATTGCTGTTCGGCTGTTGGAGCCCATCAAGGAACAGTTTCCCATCTTGACCTACGGTGATTTCTACCAGCTGGCTGGTGTAGTCGCTGTTGAGGTCACCGGTGGGCCCGAAATTCCTTTCCACCCCGGAAGAGAGGATAAGCCAGAGCCACCTCCGGAGGGCCGATTGCCTGATGGCACAAAGGGTTCTGATCATCTGAGGGATGTGTTTGGCCACATGGGGCTTAGCGATCAAGATATTGTTGCTCTCTCCGGTGCTCACACCCTTGGAAGGTGCCACAAGGAACGTTCTGGATTTGAGGGTGCCTGGACTTCCAACCCTCTGATTTTTGACAACTCGTACTTCAAGGAACTGTTGTCTGGTGAGAAAGAAGGCCTCCTGCAGTTGCCATCTGACAAAGCACTCCTTACTGACCCAGTATTCCGCCCTCTGGTTGAGAAATATGCAGCGGATGAAGATGCCTTTTTCGCTGATTATGCTGAGGCACATCTAAAACTCTCTGAACTTGGGTTCGCCGATGCATAA 645 0.524 MVRIAWHSAGTYDVKTKTGGPFGTMKQPAELAHGANNGLDIAVRLLEPIKEQFPILTYGDFYQLAGVVAVEVTGGPEIPFHPGREDKPEPPPEGRLPDGTKGSDHLRDVFGHMGLSDQDIVALSGAHTLGRCHKERSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQLPSDKALLTDPVFRPLVEKYAADEDAFFADYAEAHLKLSELGFADA 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1186 214 FunFam Cytosolic ascorbate peroxidase 1 103 - -
Lele10g1186 214 MobiDBLite consensus disorder prediction 77 103 - -
Lele10g1186 214 Gene3D Peroxidase, domain 2 97 203 - -
Lele10g1186 214 MobiDBLite consensus disorder prediction 80 103 - -
Lele10g1186 214 CDD ascorbate_peroxidase 1 214 - -
Lele10g1186 214 Pfam Peroxidase 1 191 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele10g1186 214 SUPERFAMILY Heme-dependent peroxidases 1 211 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele10g1186 214 ProSiteProfiles Plant heme peroxidase family profile. 39 214 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele10g1186 214 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 1 210 IPR044831 GO:0004601|GO:0034599
Lele10g1186 214 ProSitePatterns Peroxidases proximal heme-ligand signature. 119 129 IPR019793 -
Lele10g1186 214 PRINTS Plant ascorbate peroxidase signature 16 26 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele10g1186 214 PRINTS Plant ascorbate peroxidase signature 135 159 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele10g1186 214 PRINTS Plant ascorbate peroxidase signature 113 134 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele10g1186 214 PRINTS Plant ascorbate peroxidase signature 55 73 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele10g1186 214 PRINTS Plant ascorbate peroxidase signature 95 112 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele10g1186 214 PRINTS Plant ascorbate peroxidase signature 30 54 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele10g1186 214 PRINTS Plant ascorbate peroxidase signature 74 86 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele10g1186 214 PRINTS Plant ascorbate peroxidase signature 187 211 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele10g1186 214 PRINTS Haem peroxidase superfamily signature 74 86 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele10g1186 214 PRINTS Haem peroxidase superfamily signature 143 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele10g1186 214 PRINTS Haem peroxidase superfamily signature 56 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele10g1186 214 PRINTS Haem peroxidase superfamily signature 119 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele10g1186 214 Gene3D - 1 210 - -
Lele10g1186 214 FunFam L-ascorbate peroxidase, cytosolic 97 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1186 Lele-ChrLele10 23025024 23026976 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g1186 56 210 Peroxidase AT4G31760 30.808 1.17e-17 78.2