Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1182 ATGTCTAACCAATCACTGGAGAACATGATAGCTTGCTCAAAAGCACAGCAGCAAGAGAGGAAGCCGAGACCTCAGCCAGAAGAAGCGCTGAAATGCCCAAGATGTGACTCGACCAACACCAAATTCTGCTACTACAACAATTACAGTCTTTCTCAGCCAAGATACTTCTGCAAGTCATGCAGAAGATATTGGACCAAAGGAGGAACCTTGAGAAATGTTCCAGTGGGTGGAGGCTGCAGAAAGAACAAGAGATCTTCATCATCAAAGAGAGCTCAAGATCAACCACTCAACCCCCACCACCACAACAACCCACTCGCCACCATCCCTTCATTATCTTATGATTCCAATGATCTCACCCTCGCATTAGTTCGGCTCCAGAATCAATCTACTGGGCAATTGGGTTTTGAAGATCATGATCTTTCAATTCTGGGGAATCCAACAAGTTCTCATTTTGATATTCTTGGAAACACCACAAATCCTGGGTTTTTAGATGCATTTCGAAGTGCAGGATTCGTGGAAACCCATCATCATCATCAGCAGAACAATAATTTGCAGAATCTGTATTGTGGATATGGAAATGGGGACATGGGAGAGGTAGTGGACAATGGAAACAACTCAGAGATGATGATGCCGTTTGATCAAGAAATCAACAATACACCCGCCACAACGCAAGCAGTGTCGGTTACTACTATGAAGCAAGAAATAATGTGCAATGGCAGAGAACAAAGTGAAAACAAGGTTTTGTGGGGTCTTCCATGGCAGTTCAATGGGGACATAAATATGGGAGGGATTGTTTCAGGAAGAGCAAGTTGGAACAACAATGGTATCGGTTCATCTTGGCATGGTCTTCTCAATAGTCCCCTAATGTAG 870 0.4379 MSNQSLENMIACSKAQQQERKPRPQPEEALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSSSKRAQDQPLNPHHHNNPLATIPSLSYDSNDLTLALVRLQNQSTGQLGFEDHDLSILGNPTSSHFDILGNTTNPGFLDAFRSAGFVETHHHHQQNNNLQNLYCGYGNGDMGEVVDNGNNSEMMMPFDQEINNTPATTQAVSVTTMKQEIMCNGREQSENKVLWGLPWQFNGDINMGGIVSGRASWNNNGIGSSWHGLLNSPLM 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1182 289 Pfam Dof domain, zinc finger 28 84 IPR003851 GO:0003677|GO:0006355
Lele10g1182 289 MobiDBLite consensus disorder prediction 1 19 - -
Lele10g1182 289 MobiDBLite consensus disorder prediction 1 30 - -
Lele10g1182 289 ProSitePatterns Zinc finger Dof-type signature. 32 68 IPR003851 GO:0003677|GO:0006355
Lele10g1182 289 MobiDBLite consensus disorder prediction 89 110 - -
Lele10g1182 289 MobiDBLite consensus disorder prediction 75 110 - -
Lele10g1182 289 ProSiteProfiles Zinc finger Dof-type profile. 30 84 IPR003851 GO:0003677|GO:0006355
Lele10g1182 289 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 201 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1182 Lele-ChrLele10 23003896 23004765 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g1182 28 289 C2C2-Dof Transcription Factor Family AT2G28510 44.366 1.17e-47 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele10g1182 zf-Dof 4.6e-34 No_clan