Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1162 ATGTCGAAAACAGAAAACCAAATCAGCACTGGACGAAGCTCAAAGGCAGCGAGTAAAGCAAGTAAGCCTCGAAAAGAGGGCTTGGCGAAGAAGAATAAACTCGGCGATAGCAATGTGAAGGACGATAAAGTATCAATCTTTCCTTCTTCTATCACCGAGTTCTTAGAAGGAGGGAAAGGGCCTGAAATTGACCACAATGCGGCCATAAATGGGCAAACCAACGGAACTAGACCCAGCAAAGGTAAACGAAAGCAAGAATATGGCGGTTATAAAGTTGAAGAGAAAGAAAACGCAAAAATGAATGAGCTTCCGATGAGTCGAATCAAGAGAATAATGAAGGCAGAAGATCCCGAGTTACGTGCGTCTGAGGAAGCCATCTTTGTCATTAGCAAAGCTACGGTGAAGTTCCTTAAGCAATTTACGCGGGAATCTCATGCTTGTTCAGTTCAGGACCGAAAGAAATTTCTTGGTTACCAGCGCCTGTCCGATGTTGTTAGTAAGCAGAGGCGATATGACTTTCTTTTAGATTATGTTCCTGAGAAACTAAAAGCTGAAGATGCATTAAGAAAGGCATGCAAGCAGCAATTGTGA 591 0.4298 MSKTENQISTGRSSKAASKASKPRKEGLAKKNKLGDSNVKDDKVSIFPSSITEFLEGGKGPEIDHNAAINGQTNGTRPSKGKRKQEYGGYKVEEKENAKMNELPMSRIKRIMKAEDPELRASEEAIFVISKATVKFLKQFTRESHACSVQDRKKFLGYQRLSDVVSKQRRYDFLLDYVPEKLKAEDALRKACKQQL 196
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1162 196 MobiDBLite consensus disorder prediction 55 89 - -
Lele10g1162 196 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 84 191 - -
Lele10g1162 196 MobiDBLite consensus disorder prediction 1 17 - -
Lele10g1162 196 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 102 162 IPR003958 -
Lele10g1162 196 Gene3D Histone, subunit A 70 180 IPR009072 GO:0046982
Lele10g1162 196 SUPERFAMILY Histone-fold 103 179 IPR009072 GO:0046982
Lele10g1162 196 MobiDBLite consensus disorder prediction 19 40 - -
Lele10g1162 196 MobiDBLite consensus disorder prediction 1 42 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele10g1162 Lele-ChrLele10 22862109 22863567 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g1162 70 161 CCAAT-HAP5 Transcription Factor Family AT1G07980 37.234 1.99e-13 63.5
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Lele10g1162 CBFD_NFYB_HMF 4.5e-11 CL0012