Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1150 ATGAGACAGGAGTCTACAAGAATCTTGCAGGAAATTGCACTGAGGGTTGGGGCTCCATTGCCTCAATATACAACGTTTAGGACGGGATCAGGATATTTACCTGTTTTTACTAGGACAGTAGAACTTGCTGGAATAAAATTTACAGGTGAACCTGCCCATAATAAGAAACAAGCAGAGAAAAATGCAGCAATGGCGGCTTGGTCTCCTCTGAAACAGTTGGCTAGAGAAACTGCAAGCTCCTCTTTCTCTTTTGAACCTGAGAATAGTGATGAACTGCAAATCCTAATTCTCCAATTAGATTTCCAAGGAAATTTCAGATTCAAAATCCCAGGCCAACCAAAGCCCAACCTCCACCGTCTACTTCATCGAAGGCCTCTACTTGCGGCAGCAAATGACAATTCCATGGCACCACCACGATCGCCTTGCCCTGCTATTGCACCTCCGGTGTCTATAAGGACCGTAGTCCCTGTATTTGCTGCACCGCCACTTCCTCCACCAGCCGCACGGTACCATCAAGGGACGCAGCCCCTTCCCGAACAAGCTGTGCCTACCGCTGCTCCACCAGTTCCAAAAGATGAAGCAGGTGCCATCCAGAAGAAAGATTTACAAACTCCAGTTGAAATTGGAGATAGACATAGAGTCAGAATATGA 651 0.4685 MRQESTRILQEIALRVGAPLPQYTTFRTGSGYLPVFTRTVELAGIKFTGEPAHNKKQAEKNAAMAAWSPLKQLARETASSSFSFEPENSDELQILILQLDFQGNFRFKIPGQPKPNLHRLLHRRPLLAAANDNSMAPPRSPCPAIAPPVSIRTVVPVFAAPPLPPPAARYHQGTQPLPEQAVPTAAPPVPKDEAGAIQKKDLQTPVEIGDRHRVRI 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1150 216 Gene3D - 7 83 - -
Lele10g1150 216 Coils Coil 214 216 - -
Lele10g1150 216 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 4 72 IPR014720 -
Lele10g1150 216 SMART DRBM_3 5 71 IPR014720 -
Lele10g1150 216 PANTHER - 8 92 - -
Lele10g1150 216 SUPERFAMILY dsRNA-binding domain-like 8 80 - -
Lele10g1150 216 Pfam Double-stranded RNA binding motif 7 67 IPR014720 -
Lele10g1150 216 MobiDBLite consensus disorder prediction 166 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1150 Lele-ChrLele10 22775939 22776933 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g1150 10 22775939 22776933 Lele29g0238 29 1377173 1378879 CCT
Lele10g1150 10 22775939 22776933 Lele30g1170 30 14611917 14613701 CCT
Lele10g1150 10 22775939 22776933 Lele31g1311 31 19184351 19186058 CCT
Lele10g1150 10 22775939 22776933 Lele32g0225 32 1346909 1348711 CCT
Lele10g1150 10 22775939 22776933 Lele11g1175 11 18973394 18975866 hybridization
Lele10g1150 10 22775939 22776933 Lele12g0149 12 1136587 1137601 hybridization