Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1145 ATGTTTTGGAAGCTCGCTTCTTTATCTGCCCCCTCTCCTGTGGAGGCAATATTAGACCAGGAGAATTTCACTTTGGAAGAGCTTCTGGATGAAGAGGAAATAATTCAAGAATGCAAGGCCTTAAACAATCGCCTCATTAACTTTCTGAGGGACAGAGCTCAGGTTGAGCAATTGCTACACTACATTGTTGAAGAACCACCTGAAGATGCTGAAAGCAAGCGGGCCTTCAAGTTTCCTTTCATTGCCTGTGAGATTTTTACTTGTGAAATTGATGTTATTTTGAAGACTTTGGTGGAGGAAGAAGAGTTAATGAACTTACTATTCTCCTTCCTGGAGCCTAACCGTCCTCATAGCACCTTGCTGGCTGGGTACTTTAGCAAGGTTGTTGTTTGCCTAATGATTAGGAAGACTGTGCCTCTTATGAATTATGTTCGAGCCCATCAGAATGTTTTTCAGCAACTGGTTGATTTGATAGGAATTACATCCATTATGGAGATTTTAGTACGATTAGTAGGTGCTGATGACCATGTGTATCCCAACTTTATAGATGTGATACAATGGTTGGTTGAGAGCAACCTGCTAGAGATGATTGTTGATAAATTAAGCCCATCTAGTCCTCCTGAAGTTCATGCTAATGCAGCTGAAACATTGTGTACAATAACTCGAAATGCTTCGTCTGCACTAGCAACTAAACTTTCAAGCCCAAGTTTTGTGACAAGAATTTTGGATCATTCTTTGGAACATTCACAATCAAAGTCTAGCCTCATTTGCTCTCTCTGTGTGTGTATTTCTTTGCTGGATTCCAAAAGGTCTGCAAGCACGTCTCCCCTTTTTCATTCTTTCCTAAGTCAGTACATGTATGAGGCTCCAGTTCCTGTTAACCCAGACACTATTGGTGCAATGCTCCAAAAACTTGGTGACTTGCTTAAGCTTTTGCATGTATCATCCGATGAAAAGGTATTGCCTACAACATATGGAGAATTGAGGCCTCCACTTACGAAGCATCGATTAAAGATAGTTGAGTTTATTGCTGTACTTTTGAAAGCTGGGAATGAATTGGCCGAAGTAGAATTGGTCAACTCAGGAATCATACGACGAGTTATTGATCTTTTCTTTGAATATCCATTCAATAACTCATTACACCATCATGTAGAAAGTATAATAGTGTCATGTTTGGAGAGCAAAACTGATGTCGTTGTCGATTATCTTCTTCGGGAATGTGATATAATTGGAAAAGTTCTCCGAGCGGATAAAAATCCTGTTTTTTATAGTGATGGTGACCAGCCAACAGTAGCTGCTGCTGGGAAACGGACACCACGGGCAGGAAACATTGGACATATCACTCGATTTGCCAACAAACTTTTTAACCTGGTTCATAACCAAAGCCGCATACAGGCCTTTCTTCAGGAAAACAATGAGTGGAATGAATGGCAAGCTACAGTTCTACAAGAGCGTAATGTGGTTGAGAATGTTCATCGTTGGGCTTGTGGACGCCCCACTGCATTACAAGATAGGGTGAGGAATAGTAATGACGATGACCTTCATAATGGAGACTACGATGTTGCAGCATTAGCCAATAATTTGAGCCAAGCTTTTAAATACAAAATTTATGGAAATGAGGATAATGAAGAGGACCATGGAGGGCTTGGTCGAGATGATGAGGATGTCTACTTTGATGATGATTCTGCTGAAGTAGTCATATCGTCTCTAAGACTTGGTGATGATCAAGGAAGTAGCCTTTTTACAAACTCCAACTGGTTTGCATTCCAAGATGACAGAAATGGTAATGCGCCTGAGGGAACATCATCATCTGAGATGATGGATGAGATTGACTTGAATGGATCTACAAATGGTGGTAACAACAGTAGTGATGATGACGTAGTGGTAGGGGAGGAAGAGGAATTGGCTGAAAGCAGGAATACAGCAAATGACTCGTCTAACATGAGTACGAACTTCTTCAGTGTATCAAGTGATGGCAAATCAAAGAATGGTGTCACGCTAAACTCGGAAAGTGGGAAGGCAGTTGCTGCACATGATATGGGATTTTTCAGTTTTGAGGCATCTGAAAACGAGGACCTGTTTGAGGATAGGCCATTACCTGACTGGGTGGGATGGGCGGAACCATCAGACATGGAAGTTCCTGGTTCAAGGACAAATCCCTTTGTTGATCATGATGATTCTGGTAGCAATCTATCCACTAAATCTCAATTAGGCAGCCCCAATTCTTGTTCACCTTCAAATGGGGAATCCCCACCTGCAAATGATTTGCCAACCCGGGAAGGGGAGTCGACTCAAAGATCAGCAGCTGTACCCTCCCTTTTCGAAGAGGATGTTGAATTTGTTGGCGTGGAATTAGAAGGTACTGAGAAAGCTATGGAGCAGGCTCTCAAAGAAGGAATAGTTGGGGAAGCAGGACCATTCAAAAGAAATGTTGTCCCGGAAGTGCCAGAAAAGGATAACTCCGAAGGGGGCGGACCCGGGATGAAGGAATTCAACGACGCAGATTACTGGAGGGTTGATCAAGAGGTTGCTGTTCTGGAGTGA 2544 0.4245 MFWKLASLSAPSPVEAILDQENFTLEELLDEEEIIQECKALNNRLINFLRDRAQVEQLLHYIVEEPPEDAESKRAFKFPFIACEIFTCEIDVILKTLVEEEELMNLLFSFLEPNRPHSTLLAGYFSKVVVCLMIRKTVPLMNYVRAHQNVFQQLVDLIGITSIMEILVRLVGADDHVYPNFIDVIQWLVESNLLEMIVDKLSPSSPPEVHANAAETLCTITRNASSALATKLSSPSFVTRILDHSLEHSQSKSSLICSLCVCISLLDSKRSASTSPLFHSFLSQYMYEAPVPVNPDTIGAMLQKLGDLLKLLHVSSDEKVLPTTYGELRPPLTKHRLKIVEFIAVLLKAGNELAEVELVNSGIIRRVIDLFFEYPFNNSLHHHVESIIVSCLESKTDVVVDYLLRECDIIGKVLRADKNPVFYSDGDQPTVAAAGKRTPRAGNIGHITRFANKLFNLVHNQSRIQAFLQENNEWNEWQATVLQERNVVENVHRWACGRPTALQDRVRNSNDDDLHNGDYDVAALANNLSQAFKYKIYGNEDNEEDHGGLGRDDEDVYFDDDSAEVVISSLRLGDDQGSSLFTNSNWFAFQDDRNGNAPEGTSSSEMMDEIDLNGSTNGGNNSSDDDVVVGEEEELAESRNTANDSSNMSTNFFSVSSDGKSKNGVTLNSESGKAVAAHDMGFFSFEASENEDLFEDRPLPDWVGWAEPSDMEVPGSRTNPFVDHDDSGSNLSTKSQLGSPNSCSPSNGESPPANDLPTREGESTQRSAAVPSLFEEDVEFVGVELEGTEKAMEQALKEGIVGEAGPFKRNVVPEVPEKDNSEGGGPGMKEFNDADYWRVDQEVAVLE 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1145 847 Pfam SIT4 phosphatase-associated protein 131 352 IPR007587 GO:0019903|GO:0043666
Lele10g1145 847 Pfam SIT4 phosphatase-associated protein 356 490 IPR007587 GO:0019903|GO:0043666
Lele10g1145 847 SUPERFAMILY ARM repeat 149 382 IPR016024 -
Lele10g1145 847 MobiDBLite consensus disorder prediction 588 667 - -
Lele10g1145 847 MobiDBLite consensus disorder prediction 588 624 - -
Lele10g1145 847 MobiDBLite consensus disorder prediction 640 667 - -
Lele10g1145 847 MobiDBLite consensus disorder prediction 722 770 - -
Lele10g1145 847 MobiDBLite consensus disorder prediction 808 836 - -
Lele10g1145 847 MobiDBLite consensus disorder prediction 705 773 - -
Lele10g1145 847 PANTHER SIT4 YEAST -ASSOCIATING PROTEIN-RELATED 1 809 IPR007587 GO:0019903|GO:0043666
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1145 Lele-ChrLele10 22756102 22766959 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0230 29 1330317 1331904 Lele10g1145 10 22756102 22766959 CCT
Lele30g1180 30 14656876 14658931 Lele10g1145 10 22756102 22766959 CCT
Lele10g1145 10 22756102 22766959 Lele11g1173 11 18958216 18967432 hybridization
Lele10g1145 10 22756102 22766959 Lele12g0150 12 1145529 1153666 hybridization