Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1131 ATGTCTCTCTTGTTTTTGTCCTGCTACTGGCACATAAAACTACCCTCTCTCGTTAGTTTTTACGCTCATGTTTACAATAGTATATGTGCTGTTCATGACGGTAGCTTACTTCATTCTTGTCTCTCTTCGGGTTGGCGAGAGCAATCGAGATTGAGGTTGTGTAGGATTTTCTGTCTCGCATCTGTTTTGTGTGGGGTTGGAATGAGCAGTTTAAGGCCAGAATCGCATGTAGCCCAACAGATTCGGCGTGATAAGTTGAGAATCCAGAATAGTTCCCAGCATTTACAAGATTTCCCGACTAATATTGAACAATTGTCACTACACCCAAGCTTCAACTCTGATTTTCTGCAAGTTAGGAATGTCAGGAATGTAAACATGCTTTATGAACAAGCTTTTTATTCATCGGAAATTCCCAGTTTTTCACCAACTTCGAATACATTATCTGCTGGTGGCGATGTTAAACCTAGTAGACTGATGTTACCTCACTATGCTTCATTCCCCTATGCATCTGTATCGGAACCAGCACCGTCGTCCTCCGCCGATCAACCCCGAGATAACTCAGGTTATGATTGGATGATTAGCTATGGAAGTAGTTCCGGGGTTCATGAAACGAATAATCCCAACTCTAATTTTCCGACTGAGCTGAATAGTAACAACATGGCTGTGTATCAACAATTGGCGAAGCCTAGTTACAACGAACTCATCGGAAGGCAGTTAGGGGAAATGCATCATCCTTCTTCTCCACCACCTCCACTTTTCCAGAATTCTTTGCACGATATCGTCAAGTCTGCATCTATAAGTGCCCAAGGATCTGATAATCATATAGTTTCGCAGATGCAACATCATTCTGGTCATGGGATCTGGATGGGAAATCAAAATCAATCATCAAATCAGTTTCATTTCGGAAATACTAATAATTTTAGCGATACCATAAATCCTCAGGGATTATCTTTATCACTTTCATCAAATTCCCATTCCAAGGCTTCTCTTTCTGGGTTCCCATGTAGTGATGGATGTGGTGGATCAGAAGAACTTCACTCATCACGATGTGATAAATCCGCGAAATCTATCATGAAATCCTCGTCCTTAGTTCCCAAAGATTGTGGAAAATCACTCCAGGAAGTCGTTGGAGTAGCTTCGAGCACTAATGCTTATCGAAGTAATTTAGGCCCGCTTGGGCCTTTTACTGGATATGCAACCATTTTAAAGAGTTCGAGATTCTTGAAACCAGCTCAAGAGTTGTTGGATGAATTCTGTAGTGTGTGTGGATCTAACATTATGATCAAAGCACCAGTTGGTTCAGATTTTTCGACAGGGTCTGGAGAAGGAAGTGCTACTACTTCTGTAGCTGAAGCTGTCATTAATGCGACTGAAAGTGGGGTTATTGCAAAAGTGAGTGTTGGTAATCCGGGTGCTGCTTCGTGTTCTATTTTGTATAATTCCAAGGAAAATAGTGGTGATTGTGAATCAAGAGGGAACTTTGATTGTTCTTCTCGGTCGGTGTATCAGCAAAAAAAGGCGAAGCTTCTTCACATGCAAGAGGAGGTTACGAGAAAATACAGGCAATATCACCAACAAATGCAAATGGTGGTTTCATCTTTTGAGTCAGTAGCAGGTCTTAGTTCGGCTACGCCTTATATAACTATGGCTCTCAAGTCAGTAGCAAGACACTTCAAGGGCCTGAAAAATGCTATCTTGGATCAGATCAAGCTTTTAAGAGAGTTGTTGGGGGAGGATTTGTCAGGATCCACGTCTGGTACAATGATGAGTAAACTTGACACAGGCCTAACTTATCTGGACCATAGCTTTCATCAGAAGAACAAAACTGCATTTCTTGAACCTCAACAAGTATGGAGGCCACAAAGAGGTTTGCCAGAACGCGCGGTCGCAATTCTTAAAGCTTGGTTGTTTGAGCATTTCCTTCACCCGTACCCCACGGATACTGATAAACACATGCTGGCTACACAAACGGGTCTATCTCGCAACCAGGTGTCGAACTGGTTCATAAATGCTCGAGTCCGTGTGTGGAAGCCAATGGTTGAGGAAATACACAATCTTGAAACAAAAGGCATGGCGGGTGGCGGCGGCGGCGGCGGCTGCCACCTGCAGAACGAGGGAACATCTGGTGCGGAAGGAAGCGTTCAACAAGAAGAAGCAATGGTTGAAGAACCTGAACCTCCTTTTGGCAAGTTTGGTACAAGGCATAGGGATGTAATTGTGGAGAAGCAATTCCAGTGTTTGGGAATGAGTTCCTTGGGGGGAGGGAATTCGGAGGGGGTGGGATTTATGAGTTCCTCAGAGCAATGGAATCAAGAGAAGAGGTCTAAAATGGAATGTCAGATGACGAGGGCGGCGGCGGCAGCAGACATGGATGGGACATTAATGGGTTTTGTACCCTACAGGCGTGGTGGTGGAGGCCTCGATGTGGGGGGACTAGGGTCTGTGTCATTAACGTTGGGTCTTAGACATGGGGTTGAAGGCGCACAACACCACCACCAGCAACAACAACAATTACAACAACACCAGGAGGGTCAGATTAGACGTCACTTTGGAGAGCATATGATCCATGACTTTGTGGGTTAA 2583 0.4429 MSLLFLSCYWHIKLPSLVSFYAHVYNSICAVHDGSLLHSCLSSGWREQSRLRLCRIFCLASVLCGVGMSSLRPESHVAQQIRRDKLRIQNSSQHLQDFPTNIEQLSLHPSFNSDFLQVRNVRNVNMLYEQAFYSSEIPSFSPTSNTLSAGGDVKPSRLMLPHYASFPYASVSEPAPSSSADQPRDNSGYDWMISYGSSSGVHETNNPNSNFPTELNSNNMAVYQQLAKPSYNELIGRQLGEMHHPSSPPPPLFQNSLHDIVKSASISAQGSDNHIVSQMQHHSGHGIWMGNQNQSSNQFHFGNTNNFSDTINPQGLSLSLSSNSHSKASLSGFPCSDGCGGSEELHSSRCDKSAKSIMKSSSLVPKDCGKSLQEVVGVASSTNAYRSNLGPLGPFTGYATILKSSRFLKPAQELLDEFCSVCGSNIMIKAPVGSDFSTGSGEGSATTSVAEAVINATESGVIAKVSVGNPGAASCSILYNSKENSGDCESRGNFDCSSRSVYQQKKAKLLHMQEEVTRKYRQYHQQMQMVVSSFESVAGLSSATPYITMALKSVARHFKGLKNAILDQIKLLRELLGEDLSGSTSGTMMSKLDTGLTYLDHSFHQKNKTAFLEPQQVWRPQRGLPERAVAILKAWLFEHFLHPYPTDTDKHMLATQTGLSRNQVSNWFINARVRVWKPMVEEIHNLETKGMAGGGGGGGCHLQNEGTSGAEGSVQQEEAMVEEPEPPFGKFGTRHRDVIVEKQFQCLGMSSLGGGNSEGVGFMSSSEQWNQEKRSKMECQMTRAAAAADMDGTLMGFVPYRRGGGGLDVGGLGSVSLTLGLRHGVEGAQHHHQQQQQLQQHQEGQIRRHFGEHMIHDFVG 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1131 860 FunFam BEL1-like homeodomain protein 9 621 683 - -
Lele10g1131 860 SMART HOX_1 618 682 IPR001356 GO:0003677
Lele10g1131 860 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 284 705 - -
Lele10g1131 860 MobiDBLite consensus disorder prediction 171 191 - -
Lele10g1131 860 ProSiteProfiles 'Homeobox' domain profile. 615 678 IPR001356 GO:0003677
Lele10g1131 860 Gene3D - 621 683 - -
Lele10g1131 860 SMART prehox3 396 567 IPR006563 -
Lele10g1131 860 CDD homeodomain 618 679 IPR001356 GO:0003677
Lele10g1131 860 Pfam Homeobox KN domain 635 674 IPR008422 GO:0003677|GO:0006355
Lele10g1131 860 SUPERFAMILY Homeodomain-like 620 685 IPR009057 -
Lele10g1131 860 Pfam Associated with HOX 401 565 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1131 Lele-ChrLele10 22640006 22645770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g1131 402 687 Homeobox Transcription Factor Family AT4G34610 44.755 2.37e-67 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lele10g1131 POX 6.5e-39 No_clan