LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele10g1130	ATGGAATCGACCCTGTTTCAGTTGACCAAGTCCAAGACAACCTGCCCGAGAATCCTTACGTCTGCCACTAATAATTTCCTTGACATGTACTGTTACTCTTCCTCTTCCATTCCCTCTTGGCGCTGCACGCTTCGCGGCAGAGATGTTCTTGTTTTCCAGCACAAGCTCCGATGCCAAATGGAAACGACCCAGCTCCGCCAACTTCTCTCTCTAATTTGCCTCAGCCACCATGTTAGTATAGTCAAGCTTCTTGGAGCTTCAATCTCCGACGTCCACCAGATCTACCTTGTATACGAATTTGTGAGTGGAGCCAACCTCGCTGAGTGTTTGCGAAATACAAACAACCCGGACTTCACCGTTTTATCTAACTGTTTATCGAGGATGCATGTCGCGAGGGATATCGCTCACGGGCTCGATTATATTCATAATCATAACAGAACGAGCTTAAAGGCGAGGTTTGCCCATAAACACATCAATTGCGGTGCTATCATTGTCACAGAATCTTCCTTCAACGCCAAGATATGTCACTTCGGCACCGCGCAGCTGTGCGGTGATATCCTAGGAGAAGAACTCGTCGAGCAGTCGTCGTCCTTTTCCCCGTCGCCTACGAGAGGTAGTTCGCGAGCTAAAATTGAGGGAGTGAGAGGATACATGTCGCCGGAATATCAAACTAAAGGAGTGGCGACCGAAAAGTCCGATGTGTATGCATTTGGGGTGGAGATGCTGGAACTCCTATCAGGAGAGGAGCCACTGAGTTATAAGTTCGATAAGAGAAGGGGCGCTTTCATGAGAACGTCAGTGATCGAGACGGCGAGGGCTGCCGTCGACGGTGATTGTGAGGGCGGCGGGGGTACAAGGAAGTGGTTGGATTGGAGGCTGAAGGACTCATTTCCTATAGAGGTTGCAGAAAAAGCAACACGTGTAGCATTGGAGTGCGTGGACGTGGATCCAGCGAAGAGGCCCAATATGATCCACGTCGCCGGAAAAATTTCAAAGCTTTAA	1002	0.495	MESTLFQLTKSKTTCPRILTSATNNFLDMYCYSSSSIPSWRCTLRGRDVLVFQHKLRCQMETTQLRQLLSLICLSHHVSIVKLLGASISDVHQIYLVYEFVSGANLAECLRNTNNPDFTVLSNCLSRMHVARDIAHGLDYIHNHNRTSLKARFAHKHINCGAIIVTESSFNAKICHFGTAQLCGDILGEELVEQSSSFSPSPTRGSSRAKIEGVRGYMSPEYQTKGVATEKSDVYAFGVEMLELLSGEEPLSYKFDKRRGAFMRTSVIETARAAVDGDCEGGGGTRKWLDWRLKDSFPIEVAEKATRVALECVDVDPAKRPNMIHVAGKISKL	333

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele10g1130	333	Pfam	Protein tyrosine and serine/threonine kinase	60	253	IPR001245	GO:0004672\|GO:0006468
	Lele10g1130	333	Gene3D	Transferase(Phosphotransferase) domain 1	38	333	-	-
	Lele10g1130	333	ProSiteProfiles	Protein kinase domain profile.	1	333	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele10g1130	333	SUPERFAMILY	Protein kinase-like (PK-like)	55	326	IPR011009	-
	Lele10g1130	333	PANTHER	OS09G0572100 PROTEIN	19	333	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele10g1130	Lele-ChrLele10	22632092	22633502	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele10g1130	5	333	Receptor kinase-like Gene Family	AT1G51940	29.080	2.57e-33	128

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LysM	Lele10g1130		PK_Tyr_Ser-Thr	2.9e-19	CL0016