Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1120 ATGGCTGAGATTGAGGGATTTCCAGGAAGCTCCATGCATGGAGTCACTGGCAGAGAGCAAACCTTCGTATCCTCTGTTGCTTCTCCGATGGTCCCTTCCGACCACACTGCCAAATTCGCTCTCCCGGTTGATTCTGAGCATAAAGCTAAAGTCTTTAAACTCTTCTCTTTTGCCAATCCCCACATGAGAACCTTTCACTTGTCCTGGATTTCCTTCTTCACTTGCTTCGTCTCAACCTTCGCGGCAGCCCCTCTGGTTCCCATAATCCGCGACAACCTTAACCTCACCAAATACGACGTTGGGAATGCGGGAGTAGCCTCTGTCTCCGGCAGCATCTTCTCCAGGCTTACCATGGGTGCAGTTTGTGACCTCTTAGGTCCACGTTATGGCTGTGCCTTTCTCATAATGCTCACCGCACCCACGGTGTTCTGCATGTCGTTTGTGAAAGATGCTGCTGGTTACATAGCGATACGGTTCATGATAGGGTTTTCGTTGGCAACGTTTGTGTCGTGTCAGTACTGGATGAGTACTATGTTTAACAGTAAGATCGTAGGGCTCGCGAACGGGACGGCAGCTGGGTGGGGTAACATGGGAGGTGGGGCCACTCAGCTTATAATGCCATTGGTTTATGAATTGATCAAAAGAGCTGGATCTACCCCTTTTGTTGCCTGGAGAATTGCCTTCTTCATCCCTGGTTGGATGCATGTCATCATGGGAATCCTCGTCTTGACCCTCGGCCAAGACCTGCCTGATGGCAACCTCGGTGCTTTGCAGAAGAAGGGGAATGTCGCCAAGGACAAGTTCTCCAAGGTGTTGTGGTATGGGATAACGAATTACAGGACATGGATTTTTGCTCTATTGTACGGGTACTCTATGGGAGTTGAATTGACCACTGATAATGTGATTGCTGAATATTTCTATGATAGGTCAGATAGCTCAGCTCTATCATATAGTCTAACTCTATAA 966 0.4845 MAEIEGFPGSSMHGVTGREQTFVSSVASPMVPSDHTAKFALPVDSEHKAKVFKLFSFANPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKYDVGNAGVASVSGSIFSRLTMGAVCDLLGPRYGCAFLIMLTAPTVFCMSFVKDAAGYIAIRFMIGFSLATFVSCQYWMSTMFNSKIVGLANGTAAGWGNMGGGATQLIMPLVYELIKRAGSTPFVAWRIAFFIPGWMHVIMGILVLTLGQDLPDGNLGALQKKGNVAKDKFSKVLWYGITNYRTWIFALLYGYSMGVELTTDNVIAEYFYDRSDSSALSYSLTL 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1120 321 Pfam Major Facilitator Superfamily 69 294 IPR011701 GO:0022857|GO:0055085
Lele10g1120 321 SUPERFAMILY MFS general substrate transporter 58 317 IPR036259 -
Lele10g1120 321 Gene3D MFS general substrate transporter like domains 56 253 IPR036259 -
Lele10g1120 321 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 310 IPR044772 GO:0015112
Lele10g1120 321 CDD MFS_NRT2_like 65 309 IPR044772 GO:0015112
Lele10g1120 321 FunFam High affinity nitrate transporter 57 254 - -
Lele10g1120 321 ProSiteProfiles Major facilitator superfamily (MFS) profile. 64 321 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1120 Lele-ChrLele10 22568375 22569455 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g1120 1 309 Inorganic Solute Cotransporters AT5G60770 81.877 0.0 540
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0266 29 1568430 1570732 Lele10g1120 10 22568375 22569455 CCT
Lele30g1147 30 14414315 14417050 Lele10g1120 10 22568375 22569455 CCT
Lele10g1120 10 22568375 22569455 Lele11g1151 11 18779524 18781333 hybridization