Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1116 ATGGCCAAACTCAGAAGTAGCAGCAGTAAAAAGAAAGGTGGGATCGTGAAGTTGAAGGTTGTGGTAGAGAAGATCCAAAAGAAGCTGTTACCTGGTATGAAATCGAGTTCATATCGAGACGCATGGGACGAAGAAGAAGGTAGTGATGAGTCGAGCTATGTGCCAGAAGATGTGAAAGAAGGTCATTTTGCAGCGATTGCTGAGGAGGATGGAAAGGAAACAAGGAGATTTGTGGTGCCACTAAGCTGTTTAACGCACCCATGTTTTTTGAGGCTATTGGAGGAAGCAGCGGAAGAGTATGGGTTTGATCAAGAAGGTGCACTAACCATTCCTTGCAGTCCGAGAGAGCTCGAGAGGATATTGGAGGGACACTGTGAAAGTGATGCATCAGTTAGCTGTAATGCTTGTAAACCCATGGTTCAAACCTACTCCTGA 435 0.4552 MAKLRSSSSKKKGGIVKLKVVVEKIQKKLLPGMKSSSYRDAWDEEEGSDESSYVPEDVKEGHFAAIAEEDGKETRRFVVPLSCLTHPCFLRLLEEAAEEYGFDQEGALTIPCSPRELERILEGHCESDASVSCNACKPMVQTYS 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1116 144 Pfam Auxin responsive protein 40 122 IPR003676 GO:0009733
Lele10g1116 144 MobiDBLite consensus disorder prediction 34 54 - -
Lele10g1116 144 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 37 120 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1116 Lele-ChrLele10 22533342 22533776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g1116 6 130 Calmodulin-binding Proteins AT3G43120 35.938 1.62e-16 70.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g1116 10 22533342 22533776 Lele11g1149 11 18761280 18761708 hybridization
Lele10g1116 10 22533342 22533776 Lele12g0175 12 1357816 1359537 hybridization