Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1089 ATGGAACACTCCTTGTCAATTCAATGCCTTCTTCTCATCCCTTTCATATTTTCATCCTATTTGACTGCAACACAATCTTCAATAATTCCAAGGTTGTCCCCTGTTGGGGACATACCCTTACACGATTCTGCAACCCTGATGACCGCAAAAGATACAGATACAGAGGAATTGAAAACTTTCTATTTCAAACAGACACTTGATCACTTCAACTATAGGCCAGATAGCTACACAACATTTCCACAAAGATATCTAATCAATTTCAAGTACTGGGGTGGAGCCAATTCCAGTGCTCCCATATTTGCTTACCTTGGTGCAGAAGAACCCATAGATAATGACCTTAAGGTCATTGGATTTCTTAATGATAACGCCCCTTCCTTTGAGGCTCTCATAGTTTTTATAGAACACCGGTACTATGGGAAATCGGTGCCATTTGGATCCTTTGAAGCAGGATTGAAGAATGCAAAAACTAGAGGGTATTTCAACTCTGCTCAAGCTATTGCAGATTATGCAGAAGTACTCATACATATCAAGAAGAAACTGAAGGCACAGAAGTCCCCAGTGATTGTTATTGGAGGATCATATGGTGGAATGCTTGCTTCATGGTTTAGACTCAAATATCCGCATGTGGCTCTTGGTGCACTTGCTTCATCAGCTCCAATTCTCTATTTTGATAACATCACACCATCAAATGGTTACCATTCTGTTGTCACAAGGGATTTTCGAGAAGCAAGTGAAACATGCTATGAAACTATCCTCAAGTCCTGGTCTGAAATCGACAGAGTAGCTTCTGAGGCAGATGGCCTTTCCATCCTTAGTCAGAGATTCAACACTTGCCGTCCTCTGAACTCATCTTCTGAGTTGAAAGACTACCTAGAGACGATGTATGATACTGCAGCTCAATATAATCAACCACCAAGGTATCCGGTTACCGTGGTCTGTGGCGGCATCGATGGAGCCACTTTTGGAACTGATATTCTCAGTAAGATATTTGCAGGTGTAGTGGTGTATAGAGGCAATGCTACATGTAAAGTCAATGGCCCGATTAATGTAACTGAGACTGCTGTTGGTTGGAGATGGCAGACATGTAGTGAGCTGGTGATTCCTATAGGGCGTGAAAATGATACAATGTTTCAACCAAGCACTTTCGATCTCAAGAGCTATGTGAGGGATTGCAAGAAGGCATATGGTGTCGCCCCTCGGCCACATTGGGTCACTACTTACTATGGAGGCCATGATATCAAGTTGGTCCTTCAAAGGTTTGGGAGCAACATCATTTTCTCAAATGGGCTAAGAGATCCATATAGTATCGGAGGGGTTCTGGACAGCATATCGGACAGTATCGTTGCCGTCCATACAGTAAACGGATCTCATTGCTTGGATATCCTGAACACAATGCCAAGCGATCCAGAATGGCTAGTGAAACAACGAAAGGAAGAGGTGGAGATTATTACAAGGTGGATCACACAGTACTATGCGGATCTTCGAGCGCTCAAAGTCTACTAA 1503 0.4291 MEHSLSIQCLLLIPFIFSSYLTATQSSIIPRLSPVGDIPLHDSATLMTAKDTDTEELKTFYFKQTLDHFNYRPDSYTTFPQRYLINFKYWGGANSSAPIFAYLGAEEPIDNDLKVIGFLNDNAPSFEALIVFIEHRYYGKSVPFGSFEAGLKNAKTRGYFNSAQAIADYAEVLIHIKKKLKAQKSPVIVIGGSYGGMLASWFRLKYPHVALGALASSAPILYFDNITPSNGYHSVVTRDFREASETCYETILKSWSEIDRVASEADGLSILSQRFNTCRPLNSSSELKDYLETMYDTAAQYNQPPRYPVTVVCGGIDGATFGTDILSKIFAGVVVYRGNATCKVNGPINVTETAVGWRWQTCSELVIPIGRENDTMFQPSTFDLKSYVRDCKKAYGVAPRPHWVTTYYGGHDIKLVLQRFGSNIIFSNGLRDPYSIGGVLDSISDSIVAVHTVNGSHCLDILNTMPSDPEWLVKQRKEEVEIITRWITQYYADLRALKVY 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1089 500 Gene3D Serine carboxypeptidase S28, SKS domain 228 381 IPR042269 -
Lele10g1089 500 Gene3D alpha/beta hydrolase 61 487 IPR029058 -
Lele10g1089 500 PANTHER PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED 48 493 - -
Lele10g1089 500 SUPERFAMILY alpha/beta-Hydrolases 129 411 IPR029058 -
Lele10g1089 500 FunFam Serine carboxypeptidase S28 family protein 228 356 - -
Lele10g1089 500 Pfam Serine carboxypeptidase S28 64 477 IPR008758 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1089 Lele-ChrLele10 22301028 22304054 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g1089 10 22301028 22304054 Lele29g0307 29 1817917 1823180 CCT
Lele10g1089 10 22301028 22304054 Lele30g1108 30 14152426 14157771 CCT
Lele10g1089 10 22301028 22304054 Lele31g1242 31 18704363 18709593 CCT
Lele10g1089 10 22301028 22304054 Lele32g0286 32 1783007 1788353 CCT