Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1088 ATGGCTAACCTTATTATGTGCTCGTTCCAACGGTTTTTCTGGTTCTTCCTGATCTTCTTCCTTTGTGTTGATGCTCTCAACATCAAACCAAGGTTAGGAGTTTCAAGGAAAATCCATAAACAACGTCTTCAACCACAAACCTCGTCTTCCCAGAATTCGGTTGAGGAAGAAGTTGAGACATTCTACTACACCCAAAGACTGGATCACTTCAACTACAGGCCTGACAGCTACGCCACTTTTCAACAAAGGTATCTCATAAATTCTAAGTTCTGGGCTGGACCTAACTCAAGCGCACCCATTTTTGCATACCTTGGTGCAGAAGAGCCAGTCGACGAGGATATAAATGTTGTCGGATTTCTCAGAGAAAACGCCCCTCAATTCAATGCTCTTATTGCTTATATTGAGCATAGATTCTACGGGAAATCCATACCATTCGGTTCCATGAAGAAAGCAATGAAGAAAGCAAATACTCGAGGCTATTTCAACTCAGCCCAAGCTCTAGCAGACTATGCTGCTGTTCTTTTACACATAAAGGAACGCTTGTCTGCTCACACGTCTCCCATCATCGTTATCGGAGGATCCTATGGTGGAATGCTTGCCTCGTGGTTCAGGCTAAAGTATCCCCACATTGCTCTCGGTGCTTTGGCTTCATCAGCACCCATTCTTTACTTCAATGGCGTCGCCCCACAAGCTGGATATTATTATATTGTCACCAAGGATTTTAAAGAAGCTAGTGAGAGCTGCTACCAAACTATAAGTAAATCATGGTCTGAGATCGACAGGGTGGCTAAGATGCCTAACGGTCTTTCAGTTCTCAGCAACACATTCAAAACTTGCAGCAAACTGAGACACATTTTTGAGCTGAAGGATTACTTGGATTCAATATATACTGATGCAGCTCAGTATAATGAACCTCCAGATTACCCAGTTAATGTGATGTGCGAAGCCATTGATGCAGCAGCAAAGAAAAACGATACTCTTGGCCAAATATTTGAAGGTCTTGTGGCTTATAACGGAAACAAGTCCTGCTATGACCCCAATCAATTCAATCATCCCACCGAAACTAACATTGGATGGAGATGGCAGAGTTGTAGCGAGATGGTGATGCCTATCGGTCATGATAGGGACGATACAATGTTCCCACCGGAACCTTTCGATATGAAGAGCTTTGTGGATGAATGCAAGAGCTTGTATGGCGTTCGTCCACGACCTCATTGGGTGACAACTTATTATGGGGGTCCTGATTTAAAGCTGATCCTCCATAGATTTGCCAGCAACATTATCTTCTCCAATGGATTGAGAGATCCGTACAGTTCCGGCGGGGTTTTGGAGGATATATCAGATAGTATCATTGCTCTATCCACGGTCAACGGATCTCATTGCCTGGACATACTCGAAGCTCAACCAAGCGATCCTGAATGGTTGGTGAAGCAGAGAAAGACAGAGATCAGAATAATTAAAGGCTGGATCGGCGAGTACCAAGCAGATACACTTGCATTACTAAATAAGCAAGTTCATCATTAA 1524 0.4357 MANLIMCSFQRFFWFFLIFFLCVDALNIKPRLGVSRKIHKQRLQPQTSSSQNSVEEEVETFYYTQRLDHFNYRPDSYATFQQRYLINSKFWAGPNSSAPIFAYLGAEEPVDEDINVVGFLRENAPQFNALIAYIEHRFYGKSIPFGSMKKAMKKANTRGYFNSAQALADYAAVLLHIKERLSAHTSPIIVIGGSYGGMLASWFRLKYPHIALGALASSAPILYFNGVAPQAGYYYIVTKDFKEASESCYQTISKSWSEIDRVAKMPNGLSVLSNTFKTCSKLRHIFELKDYLDSIYTDAAQYNEPPDYPVNVMCEAIDAAAKKNDTLGQIFEGLVAYNGNKSCYDPNQFNHPTETNIGWRWQSCSEMVMPIGHDRDDTMFPPEPFDMKSFVDECKSLYGVRPRPHWVTTYYGGPDLKLILHRFASNIIFSNGLRDPYSSGGVLEDISDSIIALSTVNGSHCLDILEAQPSDPEWLVKQRKTEIRIIKGWIGEYQADTLALLNKQVHH 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1088 507 Gene3D alpha/beta hydrolase 62 490 IPR029058 -
Lele10g1088 507 FunFam Serine carboxypeptidase S28 family protein 229 357 - -
Lele10g1088 507 Pfam Serine carboxypeptidase S28 65 480 IPR008758 GO:0006508|GO:0008236
Lele10g1088 507 PANTHER PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED 22 496 - -
Lele10g1088 507 Gene3D Serine carboxypeptidase S28, SKS domain 229 384 IPR042269 -
Lele10g1088 507 SUPERFAMILY alpha/beta-Hydrolases 118 413 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1088 Lele-ChrLele10 22279144 22281926 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g1088 10 22279144 22281926 Lele29g0309 29 1839867 1845836 CCT
Lele10g1088 10 22279144 22281926 Lele30g1105 30 14134544 14138537 CCT
Lele10g1088 10 22279144 22281926 Lele31g1239 31 18681471 18684640 CCT
Lele10g1088 10 22279144 22281926 Lele32g0288 32 1803167 1806308 CCT
Lele10g1088 10 22279144 22281926 Lele11g1118 11 18448483 18459413 hybridization
Lele10g1088 10 22279144 22281926 Lele12g0203 12 1613262 1616271 hybridization