Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1087 ATGCCTCGCCGCGGTGGCAGAAAGCAACCTGAAGTTCTGCCGCTTCAACCGTCTCCCGCTCCATCCCAATCTGTCTCGGGTCAAAATGTTGCTCGAGGTGGGTCACAAGGAGGACAAGGACGTGGTTCTCCCTCTGTATCGGTAGCGTCTGCTTCTCCGACTTCGGCCATTACTACAGATTCTCCTCCGAGTAATGAGTTGGCGCAGATGACGTTGCAGTCTCCGGCGCCTTCGTCGTCAAAAGCCTTGAGATTTGCCGACCGACCAGATTTTGGCAGAATGGGGAAAAAAATTCGAGTTCGTGCGAATCACTTTCTCGTTGATGTTGCTGATAGAGATCTTCATCACTATGATGTATCCATATCTCCAGAAATTACCTCCAAACAGATCAGTAGGAATGTGATGAATCAACTAGTCCACTTGTACCGAGAGTCACATCTCGACAAACGAATACCAGCTTATGATGGCAGGAAGAGTCTCTTCACAGCAGGCCCTTTGCCCTTCTTTTCAAAGGAATTTGTGGTCAAGCTGATCGACAGCGATGAAAATGGAAGTTCTTCTGCTTCAACAAAGAAGAAACGTGAGCGCGAGTTCAAGGTCACTATTCGTTATGCTTCTAAGGCTGATCTTCATCATCTGCAGCAGTTTCAAAGGGGTCGACAGCTGGACAATCCACAAGAAACTATTCGAGCTCTTGATGTTGTGCTGAGGGAATCGCCATCTGCAAAGTTTCCTCTTGATGACAAGAGAACAAGAACAACTGTTGTTCAATATTTTCGTGAGAAATACAATGTTGAGCTGAAGTATTTGTCTCTTCCTGCCCTCCAAGCTGGGAATGACACAAAACCTATTTATATGCCTATGGAGGTTTTTCTCTTCACTTTTCTTCCTTTTGTACATCCTGCCTCACTGATTCTATGTTATAATTCAACCTTGTTTAACAAGTTTTTCCTCCACGCGGTAGCTTTGCAAGATAGCTGCTGGGCAAAGATGGCCAGACGTAACAATTTTAATAGAGACAAGATTATGCATGAATTCGGAATTAAAGTGAGTGAAGAGTTGGCATTGTGTGATGCACGTGTTTTGCCTCCTCCAAGGCTTAAATATCATGAAACTGGGAAGGAACCAATTGTTGAACCCATGAGGGGTCATGCTATGAAAATGATAAATGGTGGAAATGTGCAATATTGGACTTGTCTGAACTTTTCTACACGCTTGAGCAGAGATTTGCCACGTCAATTCTGTTATGAGTTGGTTTTTAATCGAACCCCTTTGCTTCCTATAAGGTCAGCTCATCCTGGTCAAATAGAGGGAGTTCTTAGAGATGTTTACAAGAAATCTGATGGGAAACTTCAGTTGTTGATTATAATCTTACCTGACATCAAAGGTTCTTATGCCAAGATAAAACTCATCTGTGAAACAGAATTGGGAATAGTGTCTCAATGCTCTCAGCCCAAGGGAGCTGCAAGGCTACAGAAGCAATATCTTGAAAATTTGGCTCTCAAGATCAATGTTAAGGTTGGAGGGCGGAATACGGTGTTGATTGATGCAATTCAGAGGAGAATTCCTCATGTGACTGATCGCCCTACTATAATATTTGGTGCGGATGTAAGACATCCTAAGCCATGGAAGAACTCGAGCCCTTCTATAGCTGCTGTTGTAGCATCCATGGATTGGCCTGAGGTCACTAAGTACCGTGGAATTGTTTCTGCCCAAGCACACCGGGAAGAAATTATACTCGATCTCTATAAAACTTCTCAGGATCCTCAGAAGGGAGTTGTACACGGTGGAATGATTAGAGCATTAGTAATAGGGCATCATCTTGACGAACAAGAGCTTAAGGCATATTGGTCAGCTTGTGCCTCCTTACAGGAAGGATATATGCCAAGAATAACTTTCTTGGTGGTACAGAAAAGACATCACACTCGATTCTTCCCTATTGATCATAACAGTCGTGATCAAACTGATAAAAGTGGAAATATTTTGCCAGGCACTGTTGTTGATACTCGTATTTGTCATCCCAGAGGATTTGACTTTTATCTCAACAGTCATGCTGCCATTATGGGAACTAGCCGACCTGCACGTTATCATGTATTGTTTGATGAAAACGACTTCAAGGCTGATGAGTTGCAGACTTTGACAAATAATTTGTGTTACACGTATGCAAAGTGCACTAGATCGGTGTCCATAGTTCCTCCTGCTTATTATGCCTATTTGGCTGGTTTACGTGCTTGCTACTACATTGAAGGCGAGACATCGGATTTGGATTCTGGGAGTGGAAGTAGGAGCACTAACGTGGTGGTAACTCTTCCGGAAATCAAGCCCAATGTCAAGGATGTTATGTTTTACTGCTAA 2355 0.434 MPRRGGRKQPEVLPLQPSPAPSQSVSGQNVARGGSQGGQGRGSPSVSVASASPTSAITTDSPPSNELAQMTLQSPAPSSSKALRFADRPDFGRMGKKIRVRANHFLVDVADRDLHHYDVSISPEITSKQISRNVMNQLVHLYRESHLDKRIPAYDGRKSLFTAGPLPFFSKEFVVKLIDSDENGSSSASTKKKREREFKVTIRYASKADLHHLQQFQRGRQLDNPQETIRALDVVLRESPSAKFPLDDKRTRTTVVQYFREKYNVELKYLSLPALQAGNDTKPIYMPMEVFLFTFLPFVHPASLILCYNSTLFNKFFLHAVALQDSCWAKMARRNNFNRDKIMHEFGIKVSEELALCDARVLPPPRLKYHETGKEPIVEPMRGHAMKMINGGNVQYWTCLNFSTRLSRDLPRQFCYELVFNRTPLLPIRSAHPGQIEGVLRDVYKKSDGKLQLLIIILPDIKGSYAKIKLICETELGIVSQCSQPKGAARLQKQYLENLALKINVKVGGRNTVLIDAIQRRIPHVTDRPTIIFGADVRHPKPWKNSSPSIAAVVASMDWPEVTKYRGIVSAQAHREEIILDLYKTSQDPQKGVVHGGMIRALVIGHHLDEQELKAYWSACASLQEGYMPRITFLVVQKRHHTRFFPIDHNSRDQTDKSGNILPGTVVDTRICHPRGFDFYLNSHAAIMGTSRPARYHVLFDENDFKADELQTLTNNLCYTYAKCTRSVSIVPPAYYAYLAGLRACYYIEGETSDLDSGSGSRSTNVVVTLPEIKPNVKDVMFYC 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1087 784 CDD PAZ_argonaute_like 237 290 - -
Lele10g1087 784 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 81 241 - -
Lele10g1087 784 ProSiteProfiles Piwi domain profile. 453 749 IPR003165 GO:0003676
Lele10g1087 784 SUPERFAMILY PAZ domain 98 296 IPR036085 GO:0005515
Lele10g1087 784 MobiDBLite consensus disorder prediction 18 80 - -
Lele10g1087 784 Pfam PAZ domain 222 292 IPR003100 GO:0005515
Lele10g1087 784 CDD Piwi_ago-like 341 748 IPR045246 -
Lele10g1087 784 ProSiteProfiles PAZ domain profile. 223 295 IPR003100 GO:0005515
Lele10g1087 784 Gene3D - 521 784 IPR036397 GO:0003676
Lele10g1087 784 Pfam N-terminal domain of argonaute 96 236 IPR032474 -
Lele10g1087 784 Pfam Piwi domain 455 744 IPR003165 GO:0003676
Lele10g1087 784 SMART Piwi_a_2 453 749 IPR003165 GO:0003676
Lele10g1087 784 MobiDBLite consensus disorder prediction 1 85 - -
Lele10g1087 784 Pfam Argonaute linker 2 domain 331 369 IPR032472 -
Lele10g1087 784 Gene3D paz domain 171 293 - -
Lele10g1087 784 SUPERFAMILY Ribonuclease H-like 447 749 IPR012337 -
Lele10g1087 784 Gene3D - 361 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1087 Lele-ChrLele10 22251793 22257274 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g1087 244 784 Eukaryotic Initiation Factors Gene Family AT1G48410 51.803 0.0 579