LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele10g1085	ATGGCTAACCTTATTATGTGCTCGTTCCAACGGTTTTTCTGGTTCTTCCTGATCTTCTTCCTTTGTGTTGATGCTCTCAACATCAAACCAAGGTTAGGAGTTTCAAGGAAAATCCATAAACAACGTCTTCAACCACAAACCTCGTCTTCCCAGAATTCGGTTGAGGAAGAAGTTGAGACATTCTACTACACCCAAAGACTGGATCACTTCAACTACAGGCCTGACAGCTACGCCACTTTTCAACAAAGGTATCTCATAAATTCTAAGTTCTGGGCTGGACCTAACTCAAGGGCACCCATTTTTGCATACCTTGGTGCAGAAGAGCCTGTCGACGAGGATATAAATGTTGTCGGATTTCTCAGAGAAAACACCCCTCAATTCAATGCTCTTATTGTTTATATTGAGCATAGATTCTACGGGAAATCCATACCATTCGGTTCCATGAAGAAAGCACTGAAGAAAGCAAATACTCGAGGCTATTTCAACTCAGCCCAAGCTCTAGCAGACTATGCTGCTGTTCTTTTACACATAAAGGAACGCTTGCTAAAGTATCCCCACATTGCTCTCGGTGCTTTGGCTTCATCAGCACCCATTGTTTACTTCAATGGCGTCGCCCCACAAGCTGGATATTATTATATTGTCACCAAGGATTTTAAAGAAGCTAGTGAGAGCTGCTACCAAACTGTAAGTAAATCATGGTCTGAGATCGACAGGTTGGCTAAGATGCCTAACGGTCTTTCAGTTCTCAGCAACACATCTAAAACTTGCAGCAAACTGAGACACAGTTTTGAGCTGAAGGATTACTTGGATTCAATATATACTGATGCAGCTCAGTATAATGAACCTCCAGATTACCCAGTTAATGTGATGTGTGAAGCCATTGATGCAGCAGCAAAGAAAAAAGATACTCTTGGCCAAATATTTGAAGGGACGATCGATACTATGTTCCCATCGGAACCTTTCGATATGAAGAGCTTTGTGGATGAATGCAAGAGCTTGTATGGCGTTCTCCCACGACCTCATTGGGTGACAACTTATTATGGGGGTCCTGACTTGAAGCTGATCCTCCATAGATTTGCCAGCAACATTATCTTCTCCAATGGGTTGAGAGATCCGTACAGTTCCGGTGGGATCTCATTGCCTGGACATACTCGAAGCTCAACCCAGCGATCCGGAATGGTTGGTGAAGCAGAGAAAGACAGAGATCAGAACAATTAG	1218	0.4327	MANLIMCSFQRFFWFFLIFFLCVDALNIKPRLGVSRKIHKQRLQPQTSSSQNSVEEEVETFYYTQRLDHFNYRPDSYATFQQRYLINSKFWAGPNSRAPIFAYLGAEEPVDEDINVVGFLRENTPQFNALIVYIEHRFYGKSIPFGSMKKALKKANTRGYFNSAQALADYAAVLLHIKERLLKYPHIALGALASSAPIVYFNGVAPQAGYYYIVTKDFKEASESCYQTVSKSWSEIDRLAKMPNGLSVLSNTSKTCSKLRHSFELKDYLDSIYTDAAQYNEPPDYPVNVMCEAIDAAAKKKDTLGQIFEGTIDTMFPSEPFDMKSFVDECKSLYGVLPRPHWVTTYYGGPDLKLILHRFASNIIFSNGLRDPYSSGGISLPGHTRSSTQRSGMVGEAEKDRDQNN	405

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele10g1085	405	PANTHER	PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED	313	386	-	-
	Lele10g1085	405	Gene3D	alpha/beta hydrolase	56	181	IPR029058	-
	Lele10g1085	405	Gene3D	alpha/beta hydrolase	321	379	IPR029058	-
	Lele10g1085	405	FunFam	Serine carboxypeptidase S28 family protein	206	334	-	-
	Lele10g1085	405	Gene3D	alpha/beta hydrolase	183	205	IPR029058	-
	Lele10g1085	405	Gene3D	Serine carboxypeptidase S28, SKS domain	311	320	IPR042269	-
	Lele10g1085	405	Pfam	Serine carboxypeptidase S28	183	301	IPR008758	GO:0006508\|GO:0008236
	Lele10g1085	405	Pfam	Serine carboxypeptidase S28	65	180	IPR008758	GO:0006508\|GO:0008236
	Lele10g1085	405	MobiDBLite	consensus disorder prediction	376	405	-	-
	Lele10g1085	405	MobiDBLite	consensus disorder prediction	376	393	-	-
	Lele10g1085	405	Gene3D	Serine carboxypeptidase S28, SKS domain	206	303	IPR042269	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele10g1085	Lele-ChrLele10	22228989	22231713	Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lele10g1085	10	22228989	22231713	Lele12g0204	12	1639357	1642151	hybridization