Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1081 ATGGCGGAGGACCGCAACGGCGATAAGGTTGAAAACAGTGATTACAGTTCAGAGGATGAAGGAACTGAGGATTACAGGCGAGGAGGTTACCATGCGGTTCGAATTGGGGATACTTTCAATAATGGGTGTTATGTGGTGCAGGCCAAGCTTGGTTGGGGTCATTTTTCTACTGTCTGGCTTTCTTGGGACGTCCAGAGATCGCACTATACTGAAGCTGCCATGGATGAAATAAATATTCTTAAACAGATTGCAGAAGGGGACCCAGATGACAAGAAATGTGTTGTAAAGCTTTTGGATCACTTCAAGCATTCTGGCCCTAATGGTCAGCATGTATGATCACAGAGAGTCAGGTGCGGACGCATCCTTCCTAGCACCAAGGATAATTTTGTATCCAAGAATGAGGTCACAAAAGATAACGCAAGTTCAAATGGAAATCTGACCAAAAACCAAAAAAAGAAAATGCATAGAATGGCTAAAGTTGAGAATGAAATTATTGAGGAGGCTGAGGGTTCTAAAGATCATGATCAAGAAGATTCTAGGAATGATCTAAAATCAAATGCTGGATATGTTGAAGATAAACCCAGTAGTTCAGTGAGTAAAGATGAACCTACAAAGGTAGTCGAGACTAAGGATGTTCCGCAAGGAAGTGAGACTCACAGGAAAAGTAGCCGTTCCATGAGAAAAAAGCTGCTTGCAGCTGTTGATCTAAAGTGCAAACTGGTTGATTTCGGAAATGCTTGTTGGACTTATAAACAATTCACAAACGATATTCAAACAAGGCAGTATAGGTGTCCTGAGGTTATTCTTGGATCTAAATACTCAACTCCAGCGGATTTGTGGTCTTTTGCTTGCATTTGCTTTGAGCTGGCCACTGGTGATGTTCTTTTTGATCCTCACAGTGGTGACAACTATGATAGGGATGAGGATCACCTGGCATTGATGATGGAACTTCTTGGAATGATGCCTCGCAAGATCGCACTAGGTGGCCGCTATTCCCGGGAATTTTTCAATAGATATGGTGATCTAAGGCACATTCGTCGGTTGCGGTTCTGGCCTCTTAATAAGGTGCTTATGGAGAAGTATAATTTCAGTGAGCAAGACGCAAAAGACATGACAAACTTCCTCGTTCCCATACTTGATTTTGTCCCTGAAAACAGGCCAACAGCTGCTCAGTGTCTTAGTCATACCTGGTTCAGTGCTGGTCCTAGGATTCTTCAGCCCTCTACAACTACCGTGCAACCTGAGGCCATTGAGGGGGGAATGTCTGAAGAAACCAAGCGGGATAAATCTGAGCAGGAAGCTGTGGAAGTTGGTGTGGGCAATATAGCCATCGATGGAACCCCAAAGCCCCTCAAAAAGTCCCAATCTGTTAAGTTATAA 1380 0.4362 MAEDRNGDKVENSDYSSEDEGTEDYRRGGYHAVRIGDTFNNGCYVVQAKLGWGHFSTVWLSWDVQRSHYTEAAMDEINILKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVXSQRVRCGRILPSTKDNFVSKNEVTKDNASSNGNLTKNQKKKMHRMAKVENEIIEEAEGSKDHDQEDSRNDLKSNAGYVEDKPSSSVSKDEPTKVVETKDVPQGSETHRKSSRSMRKKLLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIALGGRYSREFFNRYGDLRHIRRLRFWPLNKVLMEKYNFSEQDAKDMTNFLVPILDFVPENRPTAAQCLSHTWFSAGPRILQPSTTTVQPEAIEGGMSEETKRDKSEQEAVEVGVGNIAIDGTPKPLKKSQSVKL 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1081 459 MobiDBLite consensus disorder prediction 129 148 - -
Lele10g1081 459 Gene3D Transferase(Phosphotransferase) domain 1 232 398 - -
Lele10g1081 459 SUPERFAMILY Protein kinase-like (PK-like) 234 409 IPR011009 -
Lele10g1081 459 MobiDBLite consensus disorder prediction 129 224 - -
Lele10g1081 459 SMART serkin_6 44 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g1081 459 MobiDBLite consensus disorder prediction 1 23 - -
Lele10g1081 459 Pfam Protein kinase domain 235 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g1081 459 FunFam Serine/threonine-protein kinase SRPK-like protein 228 398 - -
Lele10g1081 459 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 124 423 - -
Lele10g1081 459 MobiDBLite consensus disorder prediction 156 187 - -
Lele10g1081 459 MobiDBLite consensus disorder prediction 195 221 - -
Lele10g1081 459 SUPERFAMILY Protein kinase-like (PK-like) 39 110 IPR011009 -
Lele10g1081 459 CDD STKc_SRPK 33 398 - -
Lele10g1081 459 Gene3D Phosphorylase Kinase; domain 1 20 113 - -
Lele10g1081 459 ProSiteProfiles Protein kinase domain profile. 44 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1081 Lele-ChrLele10 22182943 22185369 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g1081 121 449 EF-hand Containing Proteins AT5G22840 58.859 9.05e-128 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Lele10g1081 Pkinase 6.8e-20 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g1081 10 22182943 22185369 Lele11g1115 11 18407789 18411068 hybridization
Lele10g1081 10 22182943 22185369 Lele12g0207 12 1676291 1678724 hybridization