Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1080 ATGGCTTTCACTTGTTCCCGCTTGCTTCTTTCTCGCTCTTCACCCTCCAACTACTCCATCTTCTCCGATCTTACCCTAGCTCGTTCTGGTGACATGCTTTTGACGCCCAGAATCCAAGTCCAATACTCCTCCAAATCCACGGGGGAGGAGCAGCGGACTTCTGCGGAAACTGCCTTATCTTATTCCAGTGAAGCCAGGCATGACGAGACAAATGAGGCTCAGAGATCGGTCGCAACCACGTCAGGCGATTTTTTCCCTGTTGGAATTCGAGAACCAGTTTATGAGGTCTCGTCCATGAGATGTTCGAAGTGTGGATCCCTCATTGTTTATGACAAATTTAATGCCTTCTTTGCTGTCATTATTTATGTATATAAGAATGCTCACCTGCATCCTTTGATGCTTAACAGTGAAGGAGGGAAAGCTTTTTTAGAGTTGAGTTGGGTTCAAGGGCCGGAGCTCTCAGACAAATGCTGCTTGACCTTCTGGAGGACCCTCTTGAAATACAACGTATATGTATTATGGGAAGAAACTGCACACATAAGAAAGGACACGACAATGTATTATGCTCTGTGGCCTAAGAAAAGCAGATTGCTGAGGGAAGAGGAGGAAATTGAGATGCTTTTGGAAAATTACCTTCAAAGATGTGAATCTTACCATGGCCAAGCTGAAAGGCTTCTAGATTTCGCAAAAGAATTGGAAGATTCTATATCTGTCAGTTTAAGATCAAGGAGGCTTGAGGTTAGCAGAGTGCAACTACTTCTCCAGGTTGGAGCATTCTGTTTGGCAGTTGGTGCCCTTATAACAGGTATTTTTGGCATGAATCTGAAGTCCCATCTTGAAGAACGTGTGTTTGCATTTTGGCTGACAACAGCTGGGATTATAGTCGGCGCAGTTGTAGCCTTCTTTCTCATGTATTCCTATCTCAAGGCAAGGAAAATATTGTGA 945 0.4423 MAFTCSRLLLSRSSPSNYSIFSDLTLARSGDMLLTPRIQVQYSSKSTGEEQRTSAETALSYSSEARHDETNEAQRSVATTSGDFFPVGIREPVYEVSSMRCSKCGSLIVYDKFNAFFAVIIYVYKNAHLHPLMLNSEGGKAFLELSWVQGPELSDKCCLTFWRTLLKYNVYVLWEETAHIRKDTTMYYALWPKKSRLLREEEEIEMLLENYLQRCESYHGQAERLLDFAKELEDSISVSLRSRRLEVSRVQLLLQVGAFCLAVGALITGIFGMNLKSHLEERVFAFWLTTAGIIVGAVVAFFLMYSYLKARKIL 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1080 314 MobiDBLite consensus disorder prediction 44 75 - -
Lele10g1080 314 Gene3D Magnesium transport protein CorA, transmembrane region 241 314 - -
Lele10g1080 314 Coils Coil 194 214 - -
Lele10g1080 314 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 60 314 IPR039204 -
Lele10g1080 314 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 249 305 IPR045863 -
Lele10g1080 314 MobiDBLite consensus disorder prediction 44 61 - -
Lele10g1080 314 Gene3D Magnesium transport protein CorA, transmembrane region 154 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1080 Lele-ChrLele10 22175855 22180590 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g1080 210 313 MRS2 Gene Family AT5G22830 79.808 2.41e-51 174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g1080 10 22175855 22180590 Lele11g1114 11 18401150 18406273 hybridization
Lele10g1080 10 22175855 22180590 Lele12g0208 12 1678822 1681535 hybridization