Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1076 ATGGCGTTTTGTTCATCCACCATCAATATCTCAAATATCCACAACTTTTCCAGCGCCTGTGCTTCCGCTGGGCAATATGCTTTCAAACTTCCATTTGAAATCAAAAGCTGGGGTTGTTTGAATATCACAAACTTGGATCAAAGGAGCCACATGCCCTCATTTCTTTATATTCATTCACCTGACAAAAGACTTGATTTCAGCATTCGATGTGTCGGATCAGAAGCTGTGACGAAGACCATCACTGAGTTGGATGAGTCCAAATTTGATAATGGCTCTGAACCCTTAATTGATCGGGATGGTGGGGATAGAGGTGGTTCTGGTGACGGTAGTGGGGGGACTGGCGGCGGCGGCTGTAATGAGGACGGTGGTAGAGATGAAAATGAGGAAGAGTTCGGTCCGTTATTGAAGTTTGTGGATGTTATGAAAGTCGCAGAAGATCGGGGTGTGAAGCTGCCTTTGGATATGGAGGAGGCAGCGAAGACAACAGGAATTCGGGAAATGTTCCTTCTTCGTTACTTGGAGTTACAGGGTTCGGTTTGGCCACTGGGTTTTTTGATGAAGCATTGTTCTATGCTTCGAAACCGAATGCTAGCTGATCCTTCTTTTCTATTTAAAGTTGGAACAGAGATTGGTATAGATTCTTGTTGCGCAACATTTGCCGAAGTTCAGAAAAGAGGCAAGGATTTTTGGGCAGAATTTGAGTTGTATGCGGCCGATCTACTGGTTGGTGTGGTTGTTGACATTGCTTTAGTTGGCATGTTAGCACCCTATGCTCGACTTGGGAAGCCATCAACGTCCAGAGGTTTGCTTGGACGCATTCAACATGCTTGCGCTGCCCTTCCTAGCAGTGTTTTTGAAGCTGAAAGGCCAGGCTGCAAGTTCTCAGTGATGCAACGCATTGCAACATACTTTTATAAGGGTGCATTGTATGGATCAGTTGGGTTTGGATGTGGCCTAGTTGGTCAAGGAATTGCAAATATGATAATGAATGCCAAAAGGAGGTTTAAGAAATCTGAAGAGGACATACCTGTGCCTCCTCTTGTTCAAAGTGCTGCTCTCTGGGGTGTGTTCCTTGCCGTGTCATCTAACACTCGATATCAAATTGTGAATGGACTGGAAGGCCTTGTGGAAGCTTCTCCTGTGGCAAAGAAGCTTCCACTCGTCGCTATGATGTTCACGGTATGCGTGCGATTTGGCAACAACATATACGGCGGTATGCAGTTCGTAGACTGGGCCAAATGGAGTGGGGTAACTGGTTTCAATGCTGCCATTAATTCTCTTCTGAACAACCATCGTCCTTTTACCAACAACGAAGATTCTGTCGTCCCAGCACTGTCCTACGGCTTTTTCAATTTTCTTCAGTCCACCTTCTCCCTCCTTCTGAACTATTTCTCGCTCTAG 1401 0.4568 MAFCSSTINISNIHNFSSACASAGQYAFKLPFEIKSWGCLNITNLDQRSHMPSFLYIHSPDKRLDFSIRCVGSEAVTKTITELDESKFDNGSEPLIDRDGGDRGGSGDGSGGTGGGGCNEDGGRDENEEEFGPLLKFVDVMKVAEDRGVKLPLDMEEAAKTTGIREMFLLRYLELQGSVWPLGFLMKHCSMLRNRMLADPSFLFKVGTEIGIDSCCATFAEVQKRGKDFWAEFELYAADLLVGVVVDIALVGMLAPYARLGKPSTSRGLLGRIQHACAALPSSVFEAERPGCKFSVMQRIATYFYKGALYGSVGFGCGLVGQGIANMIMNAKRRFKKSEEDIPVPPLVQSAALWGVFLAVSSNTRYQIVNGLEGLVEASPVAKKLPLVAMMFTVCVRFGNNIYGGMQFVDWAKWSGVTGFNAAINSLLNNHRPFTNNEDSVVPALSYGFFNFLQSTFSLLLNYFSL 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1076 466 PANTHER EXPRESSED PROTEIN-RELATED 75 417 - -
Lele10g1076 466 MobiDBLite consensus disorder prediction 87 126 - -
Lele10g1076 466 Pfam Protein RETICULATA-related 194 372 IPR021825 -
Lele10g1076 466 MobiDBLite consensus disorder prediction 87 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1076 Lele-ChrLele10 22116462 22121405 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g1076 10 22116462 22121405 Lele29g0314 29 1897110 1900429 CCT
Lele10g1076 10 22116462 22121405 Lele30g1094 30 14072131 14075434 CCT
Lele10g1076 10 22116462 22121405 Lele31g1232 31 18625617 18628947 CCT
Lele10g1076 10 22116462 22121405 Lele32g0299 32 1867474 1870803 CCT
Lele10g1076 10 22116462 22121405 Lele11g1109 11 18367555 18369934 hybridization
Lele10g1076 10 22116462 22121405 Lele12g0211 12 1742046 1744547 hybridization