Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1074 ATGGAGGACCGAACGATAACGGTCACCAACTCTCCGACCGAAACACCAGGGAACCCGGTGACGAAGGGGGCCGACGACGAGGACGTGCCGAATGTAGTGGGAGCTGTCGGAGTTGAGCCAGCCCTGAACTCTACCCCTACTGTTGGAGGAGGAACTAACGACGATTTGGGTTCGGAAATAAAGGTAAAGAAACGAAGAGGGAGGCCTCGGAAGTACGGCATAAATGGGAACCCGTTTTCCCCGGCGTCGGCGCAGTCACGATTTCCGAGTTACTCATTCGGGAGCTCTGTGAAGCGAAGTAGAGGAAGGCCTCGTGGCTCAGGAAAACTCCAAGTTTTGGCATCCATTGGTGAGTTTCTTCAAATCAAAATATCCAATAACATAACCAGTCGTGGAGTTGTTGCAGACACTGCTGGGGGAGGCTTCACTCCTCATGTCGTTACTGTGAATACCGGCGAGGATGTGGTGAATACAATTTTATCATTTTCTCAGAAAGGTCCTCGAGCTGTCTGCGTCCTTTCTGCTACTGGTGTAGTTTCCAGTGTCATCATTCGCCAATCTGGTGCTGTTAGAAGATTTGAGGGCCGCTTCGAGATTTTATCATTAACTGGATCATATACAGTGGCTGCGCGTCGCAGAACTGGCATGTTCAACGTTTCTCTGGCTAAACCTGATGGCAGGGTCTTTGGTGGTGGGGTTGAGGGCTCATTGATAGCTGCTGGACCTATTCAACTAATAGTGGGCAGTTTCAAACCAAATATCAGTAAGGAGATTCAGAGGAGACATTCAACCGTGTCTCCTTCTCTTCCAGACATGCCTGGTCATCCTGAAATGGTAGAAAGTGAACAGGACGAGCCTGTGCCGACAACTAATGGACTATTCGACAACTTCAATCATGGAACAAGCAATGGAATAGCCGACGATGTGGTTCCTGCAAATCAGAATATGCTCTCTGCCTCTTCAAATGGTATTAACATGGACTCTCAGCACATCTCAGGCCATGAAGAGCCCACAGATATGGGGATGAGCGAGCCCCATATATGA 1044 0.4933 MEDRTITVTNSPTETPGNPVTKGADDEDVPNVVGAVGVEPALNSTPTVGGGTNDDLGSEIKVKKRRGRPRKYGINGNPFSPASAQSRFPSYSFGSSVKRSRGRPRGSGKLQVLASIGEFLQIKISNNITSRGVVADTAGGGFTPHVVTVNTGEDVVNTILSFSQKGPRAVCVLSATGVVSSVIIRQSGAVRRFEGRFEILSLTGSYTVAARRRTGMFNVSLAKPDGRVFGGGVEGSLIAAGPIQLIVGSFKPNISKEIQRRHSTVSPSLPDMPGHPEMVESEQDEPVPTTNGLFDNFNHGTSNGIADDVVPANQNMLSASSNGINMDSQHISGHEEPTDMGMSEPHI 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1074 347 Gene3D - 144 266 - -
Lele10g1074 347 CDD DUF296 143 250 IPR005175 -
Lele10g1074 347 SUPERFAMILY AF0104/ALDC/Ptd012-like 141 256 - -
Lele10g1074 347 ProSiteProfiles PPC domain profile profile. 139 272 IPR005175 -
Lele10g1074 347 MobiDBLite consensus disorder prediction 78 97 - -
Lele10g1074 347 MobiDBLite consensus disorder prediction 1 18 - -
Lele10g1074 347 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 30 320 IPR039605 GO:0003680
Lele10g1074 347 MobiDBLite consensus disorder prediction 1 107 - -
Lele10g1074 347 MobiDBLite consensus disorder prediction 262 287 - -
Lele10g1074 347 Pfam Plants and Prokaryotes Conserved (PCC) domain 144 251 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1074 Lele-ChrLele10 22097700 22099804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g1074 62 260 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 47.032 2.13e-51 172