Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1059 ATGGACGACTCCAAGGCGGTCGGAAATTCCAACCCTAGCGATGGAGCAAAAGCAAAGAAGCCGAAGGTGGTAGTGATAATGGGTCCCACTGGCTCTGGCAAGTCCAAGCTCGCCATTGATCTTGCTTCTCACTTCCCGGTCGAAGCTATCAACGCTGATTCCATGCAAGTTTACCGAGGCCTGGATGTTCTCACGAATAAAGTTCCACTCTCGGACCAAAAGGGGGTGCCTCATCATCTTCTGGGTACTATAAGCCCAAACGTGGAATTCACAGCTAAAGAATTTAGAGATTCTGCTATCCCTCTCATCAATGACATATCTGCTCGCAACAACTTGCCTGTCATAGTTGGGGGTACGAACTATTTCATCCAGGCTCTCGTGAGTCCATTCCTTCTAGATGAGTCAGTTGAAGATATGGATGAAACCTGCATGGTCAATCTCTCTGGTACTGCACCATTGGATAAGAGTTTAATCCCTGAAAAGGGCAGTTCAAACAATAATTATGATTTTCTTAAAGATATTGATCCAGTTGCAGCAAATAGAATGCATCCAAATAACCATAGAAAGATTAGTCAATACCTTAATTTGTATGCTCGCACTGAAGTTCTTCCAAGCAAAATTTTCCAGGGAAAAGCCGCGGAGTGGGGTCAAGTTGGTAACTCGAGATACGATTGCTGTTTTATATGTGTGGATGCATCTGTCCCTGTACTGGACAGATATGTAGAACAGAGGGTAGATTGCATGATGGAGGCTGGATTACTTAACGAAGTCTATGACATTTACAATCCAATTGCTGATTATAGTCGAGGCTTGCGGCAGGCCATCGGCGTCCGTGAATTTGAACCTTTTCTGAAAACCCTTGTAATTGAAGAAATCAACAAAAGAAAGAAAGAATTGGCTGAGGATTCCGGGAGAGAAAAGGGGGATAAATTGTCAAATGATGATCCAAGGGAGCTCTTGAAGTTGGCTTCTGACACGAAATCCATTACGCTTATGGAAGAAGCGATTGAAAAAGTAAAGGTTAACACACGGAGACTAGTCCGCCGTCAGAAGAGGATGCTTAATCGACTGCATAATTTGTTTGATTGGACCATACACTACGCGGATTCCACAGAATCATTATCAAGCAAATCAGAGGATATATGGACTGTTCAAGTGGTAGAACCTGCGGCGAAGATCGTTAGATCTTTCCTTGGTAATAATAATGAGAGCTTGCCCTCAAATAGCAGTGGGATGAAGATACTTCAAAGAGACCTCTGGACTCAATACATATGCAAGGCCTGTGGAGATAGGGTGCTTAGAGGAATACATGAATGGGAACAACACAAACAGGGTCGTAGACACCGCAAACGTATTTCTAGTCTCAAGAACAAATCACAAGTTGGTGCGTCATTTCTTCTTTCTCGCCTCCCATAG 1416 0.4364 MDDSKAVGNSNPSDGAKAKKPKVVVIMGPTGSGKSKLAIDLASHFPVEAINADSMQVYRGLDVLTNKVPLSDQKGVPHHLLGTISPNVEFTAKEFRDSAIPLINDISARNNLPVIVGGTNYFIQALVSPFLLDESVEDMDETCMVNLSGTAPLDKSLIPEKGSSNNNYDFLKDIDPVAANRMHPNNHRKISQYLNLYARTEVLPSKIFQGKAAEWGQVGNSRYDCCFICVDASVPVLDRYVEQRVDCMMEAGLLNEVYDIYNPIADYSRGLRQAIGVREFEPFLKTLVIEEINKRKKELAEDSGREKGDKLSNDDPRELLKLASDTKSITLMEEAIEKVKVNTRRLVRRQKRMLNRLHNLFDWTIHYADSTESLSSKSEDIWTVQVVEPAAKIVRSFLGNNNESLPSNSSGMKILQRDLWTQYICKACGDRVLRGIHEWEQHKQGRRHRKRISSLKNKSQVGASFLLSRLP 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1059 471 Gene3D - 21 420 IPR027417 -
Lele10g1059 471 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 264 IPR027417 -
Lele10g1059 471 MobiDBLite consensus disorder prediction 1 21 - -
Lele10g1059 471 SUPERFAMILY beta-beta-alpha zinc fingers 416 459 IPR036236 -
Lele10g1059 471 FunFam tRNA dimethylallyltransferase 418 461 - -
Lele10g1059 471 Gene3D Classic Zinc Finger 421 463 - -
Lele10g1059 471 Hamap tRNA dimethylallyltransferase [miaA]. 23 375 IPR018022 GO:0008033
Lele10g1059 471 Pfam IPP transferase 56 352 - -
Lele10g1059 471 Gene3D - 154 211 - -
Lele10g1059 471 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 20 398 IPR039657 -
Lele10g1059 471 TIGRFAM miaA: tRNA dimethylallyltransferase 23 291 IPR018022 GO:0008033
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1059 Lele-ChrLele10 21934539 21937724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g1059 11 457 C2H2 Transcription Factor Family AT2G27760 57.330 9.03e-179 507