Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1056 ATGCGCCCAAAGACCCTACTGAACGGATATGATTCGCTCAAAAACCCTAGTTATACATATACCCCGATCCCCAAATTCTCGGCCACCCTCCTACGAAAAAAGAGGGGCTGCGCAACCCCCCATCACTTGAAGCAAGTATAGATGAAGGTAATAGCTGCGTATTTGCTGGCTGTATTGGGAGGGAACGCAGCCCCTACCGCCGACGATCTGAAGCGCATCCTTAGCTCAGTTGCAGCTGAGATTGATGATGAAATGATCGAGCTGCTTTTTTCTGAAGTCAATGGTAAAGACATCACTGAGCTAATTGCTAGCGGAAGAGAGAAGTTGGCTTCAGTACCCGGTGGCGGTGGTGCAGTTGCAGTTGCTGCTGCATCTGCAGCTGGTGGTACTGCCGGTGGTGCTGCACCTGCTGCCGAGGCTAAGGAAGAAAAGAAGGTGGAAGAGAAGGAGGAGTCCGATGATGGGCATATTGAGTTAGGTTTTGCATTTTCTGTTGAGACATTGTAA 507 0.499 MRPKTLLNGYDSLKNPSYTYTPIPKFSATLLRKKRGCATPHHLKQVXMKVIAAYLLAVLGGNAAPTADDLKRILSSVAAEIDDEMIELLFSEVNGKDITELIASGREKLASVPGGGGAVAVAAASAAGGTAGGAAPAAEAKEEKKVEEKEESDDGHIELGFAFSVETL 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1056 168 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 48 155 IPR044076 GO:0002182|GO:0003735|GO:0022625
Lele10g1056 168 CDD Ribosomal_P2 48 111 IPR044076 GO:0002182|GO:0003735|GO:0022625
Lele10g1056 168 Pfam 60s Acidic ribosomal protein 65 161 - -
Lele10g1056 168 MobiDBLite consensus disorder prediction 138 156 - -
Lele10g1056 168 FunFam 60S acidic ribosomal protein P2 45 106 - -
Lele10g1056 168 Gene3D - 47 106 IPR038716 -
Lele10g1056 168 Hamap 50S ribosomal protein L12 [rpl12]. 49 165 IPR027534 GO:0003735|GO:0005840|GO:0006414
Lele10g1056 168 MobiDBLite consensus disorder prediction 129 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1056 Lele-ChrLele10 21887205 21888957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g1056 48 117 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 71.429 4.86e-28 99.4