Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele10g1033 | ATGTATCATAATCACCAGAATCACGCAAAGAACATCCGTTCTTCTTCTTCTTCTTCCAGCAGAATGCCTATTCCTTCTGAGAGGCATTTGTTCCTTCAAAGTGGAAATGGGTCTGGAGATTCTGGACTTGTTCTTTCAACTGATGCTAAACCCAGGTTGAAGTGGACACCAGATCTCCATGCCAGATTTATTGAAGCAGTTAACCAGCTGGGAGGAGCTGACAAAGCAACTCCAAAAACAGTAATGAAACTCATGGGGATTCCAGGGCTTACTTTATATCATCTTAAGAGCCATCTTCAGTACAGACTGAGCAAGAATCTGCATGGACAAAGTAGCAATGTAACACAACACAAAATCACAACAAATGCAAGTGCCGTTAGTGGAGAAAGACTTTCTGAAGCAAATGGAACTCACAATCATATGAACAACCTAACCCTTGGGCTGCAGCAGCAAGCTAATAATAACAAAGATTTACATATAAGCGAGGCGTTGCAGATGCAGATTGAGGTGCAGAGAAGACTAAATGAACAACTTGAGGTTCAGAGACACTTGCAGCTCCGAATAGAGGCACAAGGGAAATACCTTCAGGCTGTTCTTGAGAAAGCTCAGGAGACGCTTGGAAGACAGAATTTAGGAATAGTAGGTCTTGAAGCTGCCAAAGTTCAACTCTCAGAACTAGTGTCCAAAGTATCTTCTCAATGTCTGAGTTCTGCTTTTTCAGAGCTGAAGGAATTAAACAGATTTAATAGCCCCCTTATCAACACAACAAGAACCAACCAACCCAATGACTGTTCAATGGACAGTAGCCTCACATCCTGCGATGGATCTCAAAGGGATCAGGAGAATATTCCAATTGGTGGTGGTATCTGCTTAACGAGACCTTTTAATGGCGGCCACACCTTCATGGAACCAAACAAGGACGCAGCAGCTGAGGTGAAAAAGAATAATAATAATAATTTTCTCAACCCTTTGGGCAAGAATATATCAGAAAGAACTACTACTGCTGGCAACTTAACAATGAGCATTGGAGTTGAAGGAGAAACAAGAAATGGAAGCAGCATCTATCCTGAGAGAATAATAATGGGGAGAGAATCAGATAATGATCAGTTCCAGCATCGAAGCAGCAATAATAGAACAGAAGGGATGAAATTAGCAGTGGACGAAAAAGTTTCTGGAGATTATAGATTGCCGTACTTTGCTACACCAAGATTAGACCTTAACACCCACCAAGAAAATAACGATGGTGCAGCGGGTTGCAAACAACTGGACCTGAATGGATTCAGTTGGAACTGA | 1293 | 0.4192 | MYHNHQNHAKNIRSSSSSSSRMPIPSERHLFLQSGNGSGDSGLVLSTDAKPRLKWTPDLHARFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQYRLSKNLHGQSSNVTQHKITTNASAVSGERLSEANGTHNHMNNLTLGLQQQANNNKDLHISEALQMQIEVQRRLNEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGIVGLEAAKVQLSELVSKVSSQCLSSAFSELKELNRFNSPLINTTRTNQPNDCSMDSSLTSCDGSQRDQENIPIGGGICLTRPFNGGHTFMEPNKDAAAEVKKNNNNNFLNPLGKNISERTTTAGNLTMSIGVEGETRNGSSIYPERIIMGRESDNDQFQHRSSNNRTEGMKLAVDEKVSGDYRLPYFATPRLDLNTHQENNDGAAGCKQLDLNGFSWN | 430 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele10g1033 | 430 | Pfam | MYB-CC type transfactor, LHEQLE motif | 159 | 205 | IPR025756 | - | |
Lele10g1033 | 430 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 50 | 102 | IPR006447 | GO:0003677 | |
Lele10g1033 | 430 | Coils | Coil | 161 | 181 | - | - | |
Lele10g1033 | 430 | FunFam | Two-component response regulator | 46 | 107 | - | - | |
Lele10g1033 | 430 | Pfam | Myb-like DNA-binding domain | 52 | 101 | IPR001005 | - | |
Lele10g1033 | 430 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 47 | 107 | IPR017930 | - | |
Lele10g1033 | 430 | Gene3D | - | 49 | 106 | - | - | |
Lele10g1033 | 430 | MobiDBLite | consensus disorder prediction | 7 | 23 | - | - | |
Lele10g1033 | 430 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Lele10g1033 | 430 | SUPERFAMILY | Homeodomain-like | 49 | 101 | IPR009057 | - | |
Lele10g1033 | 430 | MobiDBLite | consensus disorder prediction | 363 | 382 | - | - | |
Lele10g1033 | 430 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 12 | 364 | IPR044848 | GO:0003700 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele10g1033 | Lele-ChrLele10 | 21661922 | 21664036 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele10g1033 | 82 | 430 | G2-like Transcription Factor Family | AT3G04030 | 47.899 | 6.26e-73 | 230 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-G2-like | Lele10g1033 | Myb_DNA-binding | 1e-06 | CL0123 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele10g1033 | 10 | 21661922 | 21664036 | Lele11g1068 | 11 | 17929547 | 17941562 | hybridization | |
Lele10g1033 | 10 | 21661922 | 21664036 | Lele12g0247 | 12 | 2185458 | 2188782 | hybridization |