Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1030 ATGGGAGAGACAGAGAAGGTGGTGCAGGAGGAGCTACCCAAGGCTATTGTGCGCCGGGTGGTGAAAGACGAGCTCTCACGGTGCTCAACTGACGGAGACATTTCCATTCACAAAGATGCCCTTCTCGCTTTCTCGGAAAGCGCGCGGATCTTTATCCACTACCTTTCCGCAACGGCCAACGACATATGCAAGGAAGCAAAGAGGCAGATAATAAGCGCCGATGATGTATTTAAAGCTCTTGAAGAGACTGAGTATTCCGAGTTTGTCCGGCCCCTAAAAGCTTCTCTTGAAGAGTTTAGAAAGAAGAATGCGGGAAAGAAAGCTGGTGCGTCAAAGGAAAAGGACGAGAAAAAGAAAAGGAAGTTAGAAGATGAGTCATCTGATAAAGACGAGGGTGGTGACAACAAATGA 411 0.4769 MGETEKVVQEELPKAIVRRVVKDELSRCSTDGDISIHKDALLAFSESARIFIHYLSATANDICKEAKRQIISADDVFKALEETEYSEFVRPLKASLEEFRKKNAGKKAGASKEKDEKKKRKLEDESSDKDEGGDNK 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1030 136 FunFam DNA polymerase epsilon subunit 3 3 136 - -
Lele10g1030 136 SUPERFAMILY Histone-fold 12 119 IPR009072 GO:0046982
Lele10g1030 136 MobiDBLite consensus disorder prediction 103 136 - -
Lele10g1030 136 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 11 80 IPR003958 -
Lele10g1030 136 PANTHER DNA POLYMERASE EPSILON SUBUNIT 3 3 133 - -
Lele10g1030 136 Coils Coil 63 83 - -
Lele10g1030 136 Gene3D Histone, subunit A 3 136 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1030 Lele-ChrLele10 21643978 21645347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g1030 12 115 CCAAT-HAP3 Transcription Factor Family AT4G14540 30.769 3.05e-11 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Lele10g1030 CBFD_NFYB_HMF 4.3e-09 CL0012