Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1021 ATGGCCGGCGTGGTTTCGAGGGGAGCTCAGATGTCCCTCGCTTCTTCGTCCATGTTTCCTGGATTCAGGTTCTGTCCTACCGACGAAGAGCTGATTTCCTATTATCTCAGCAAGAAATTGGAAGGCCATGAAGAAAGCGTTCAAGTTGTTTCTGAGGTTGAGATTTGCAAATACGAGCCTTGGGATTTACCAGCCAAATCATTTATGCAATCAGATAACGAGTGGTTCTTCTTCTCTCCTCGTGGAAAAAAGTACCCAAATGGATCACAAAGTAAGAGGGCAACCGAATGTGGGTATTGGAAGGCCACTGGAAAAGAGCGCAATGTAAAGTCAGGTTCTAATGTTATAGGCACGAAGCGAACTTTGGTATTCCATATGGGTCGTGCCCCAAAAGGGGAAAGAACAGAATGGATTATGCATGAGTACTGCATGAACGACAAATCCCAGGATTCTTTCGTTGTGTGTCGGCTAAAGAGGAACGCAGAGTTTCGTCAGAACGATGCTTCAAACAGAGCATCTTCAAGTCAACAGCAGGCAGTGAATTCTCATGAAAGCAACTGTGCTATCTCCGAAACTGAGATAGATCAGAGAGGTGTGTGCGAGCAAGATAAAGGGGTTGGATGCAGTTCAAAGCGCAGTAGCTCCAGTTACGATTCTCCATTAACGGAGCAAATTGATTCTGCCACTGAATCCAATCAAAGAACAGTCAACCATGACGCTGCTGGCGCAGAATCTTCAAGTCACCAAAAGGAGGTGGATGAAGAGGATTGTTATGCGGAGATACTGAAGAATGATATAATCAAATTAGATGAATCTTCATTCCCGTCGCAAGAGGCTCACGCGATAAGATCGCAGCATGATCCTGCTCAGGCACTTACATTCCAAGGCACAGCTCAACGAAGAATTAGATTAAAGGTAGATAAATCAAGGCGACGTGCAGCTGCAGGACTTGGTTTTGCAAGCTCAAAGCGCCCATCCAAGAATACCACCACCCTCTTTGGTATATTGACAAATCGAGTGCTGTTATGTGTTTGCTTCGCTTTAACTTTGATAGCCCTTTATTTGTCCTTAATGGGTTTGGGGAGTCTCAAACCAGTGAAAATCTGCGAGAGATTTGGTTTGCAAGTTTAG 1131 0.4492 MAGVVSRGAQMSLASSSMFPGFRFCPTDEELISYYLSKKLEGHEESVQVVSEVEICKYEPWDLPAKSFMQSDNEWFFFSPRGKKYPNGSQSKRATECGYWKATGKERNVKSGSNVIGTKRTLVFHMGRAPKGERTEWIMHEYCMNDKSQDSFVVCRLKRNAEFRQNDASNRASSSQQQAVNSHESNCAISETEIDQRGVCEQDKGVGCSSKRSSSSYDSPLTEQIDSATESNQRTVNHDAAGAESSSHQKEVDEEDCYAEILKNDIIKLDESSFPSQEAHAIRSQHDPAQALTFQGTAQRRIRLKVDKSRRRAAAGLGFASSKRPSKNTTTLFGILTNRVLLCVCFALTLIALYLSLMGLGSLKPVKICERFGLQV 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1021 376 FunFam NAC domain-containing protein 100-like 27 164 - -
Lele10g1021 376 MobiDBLite consensus disorder prediction 207 243 - -
Lele10g1021 376 Gene3D NAC domain 27 165 IPR036093 GO:0003677|GO:0006355
Lele10g1021 376 Pfam No apical meristem (NAM) protein 20 143 IPR003441 GO:0003677|GO:0006355
Lele10g1021 376 MobiDBLite consensus disorder prediction 202 251 - -
Lele10g1021 376 ProSiteProfiles NAC domain profile. 18 160 IPR003441 GO:0003677|GO:0006355
Lele10g1021 376 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 17 238 - -
Lele10g1021 376 SUPERFAMILY NAC domain 10 158 IPR036093 GO:0003677|GO:0006355
Lele10g1021 376 MobiDBLite consensus disorder prediction 166 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1021 Lele-ChrLele10 21609143 21610987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g1021 5 279 NAC Transcription Factor Family AT2G27300 51.273 1.95e-93 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele10g1021 NAM 1.4e-34 No_clan