Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1019 ATGGAAGATCTTCCTCCTGGTTTTCGCTTCTACCCTACAGAGGAAGAACTCGTGGCTTTCTACCTCCATAACAAGCTTCAAGGTCCAAGCAACAGCGACCACATCAACAGAGTCATCCCTGTCATTGGCATTTATGATTTTGAACCCTCCCAGCTTCCCAAGCTTGCCGGAGAGATGTGTCCTGGAGATACAGAGCAATGGTTCTTCTTCTCGGCGATACAAGAGAGGGAAGCCAGAGGAGGAAGACCAAACAGAACCACAGCTTCTGGGTATTGGAAAGCCACTGGTTCTCCTGGGTACGTTTACTCTTCTGATAACAGAGTCATTGGGTTGAAGAAAACCATGGTTTATTACAGAGGCAAAGCTCCTTCAGGAAAGAAAACCAAGTGGAAGATGAACGAATACAGAGCCATTGAATTCTCTCCCCAATCCTCCTCCATCGCTACTCCTAAGTTGAGGCAGGAATTCAGCTTGTGCCGAGTTTACGTGATATCGGGAAGCTTTCGAGCATTTGATCGCCGCCCTTTAGCTTCTTCTTCAACGAGTGGACATGATCAGAATACAGGGGTGGATGAATCGAGCTTGCGTGGACTTTCAGATGGTCAAGGATCAATTTCTGCAAACTGGAATGTAAATAATGAGGAGGAAGAAGAAGCTCTGTGGGAATGGGAACAGTTTACGACTTTGGATGATTCTGTTAATTATGACTCAAATCCTTGA 720 0.4597 MEDLPPGFRFYPTEEELVAFYLHNKLQGPSNSDHINRVIPVIGIYDFEPSQLPKLAGEMCPGDTEQWFFFSAIQEREARGGRPNRTTASGYWKATGSPGYVYSSDNRVIGLKKTMVYYRGKAPSGKKTKWKMNEYRAIEFSPQSSSIATPKLRQEFSLCRVYVISGSFRAFDRRPLASSSTSGHDQNTGVDESSLRGLSDGQGSISANWNVNNEEEEEALWEWEQFTTLDDSVNYDSNP 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1019 239 ProSiteProfiles NAC domain profile. 4 164 IPR003441 GO:0003677|GO:0006355
Lele10g1019 239 MobiDBLite consensus disorder prediction 175 207 - -
Lele10g1019 239 Gene3D NAC domain 13 167 IPR036093 GO:0003677|GO:0006355
Lele10g1019 239 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 180 - -
Lele10g1019 239 Pfam No apical meristem (NAM) protein 5 136 IPR003441 GO:0003677|GO:0006355
Lele10g1019 239 SUPERFAMILY NAC domain 3 162 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1019 Lele-ChrLele10 21593438 21594328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g1019 2 227 NAC Transcription Factor Family AT5G22380 56.410 1.93e-87 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele10g1019 NAM 3.5e-29 No_clan