Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1009 ATGTCTAAGAATAAAAGAAACCTCTTGAGATGTGCTCTCAGAGCAAATGGAGGGTGTGGCAATTGTGGCTCATCACCAAAATCCTTTGATGTACATGACCCTACCCCTAAACCTAAAATCTCCTCCCTTCCAAACCCTAATCCCACCATCTTAACATCACTGTCCAATGTTCCCAATGAACATAGCGGCAGCGACGGTGGCGACCAGGTGACTTGCACCGCATCCTCTGAGGATCAAAAGGGCTCCGAGAATTCCATGAATGGGAAACTCAGCGGCAGCATCGTCGTGGAGATGAAGTCAGAAAACCCATATAACGACTTCAGAGAATCCATGATCCAAATGATCATCGTGAGAGACATACATTCAACAAGTGAGCTTGAAGAGCTTCTCCAATGGTTTCTTAAGCTGAATTTGCCATGTTACCACCAGCTCATCCTCGAGGCTTTCTCCGACATATGTCGACAGCTTTCAACTCCACGTGTCAATCGTGAAGCTCCATGA 501 0.4651 MSKNKRNLLRCALRANGGCGNCGSSPKSFDVHDPTPKPKISSLPNPNPTILTSLSNVPNEHSGSDGGDQVTCTASSEDQKGSENSMNGKLSGSIVVEMKSENPYNDFRESMIQMIIVRDIHSTSELEELLQWFLKLNLPCYHQLILEAFSDICRQLSTPRVNREAP 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1009 166 ProSiteProfiles OVATE domain profile. 96 155 IPR006458 -
Lele10g1009 166 MobiDBLite consensus disorder prediction 44 89 - -
Lele10g1009 166 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 77 157 IPR038933 GO:0045892
Lele10g1009 166 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 94 157 IPR006458 -
Lele10g1009 166 Pfam Transcriptional repressor, ovate 100 156 IPR006458 -
Lele10g1009 166 MobiDBLite consensus disorder prediction 23 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1009 Lele-ChrLele10 21546494 21546994 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lele10g1009 Ovate 2.4e-21 No_clan