Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1005 ATGTCTAAGAATAAAAGAAACCTCTTGAGAAGTGTTCTCAGAGCAAATGGAGGGTGTGGCAATTGTGGCTCATCACCAAAATCCTTTGATGTACATGACCCTACCCCTAAACCTAAAATCTCCTCCCTTCCAAACACTAATCCCACCATCTTAACATCACTGTCCAATGTTCCCAATGAACATAGCGGCAGCGACGGTGGCGACCAGGTGACTTGCACCGCATCCTCTGAGGATCAAAAGGGCTCCGAGAATTCCATGAATGGGAAACTCAGCGGCAGCATCGTCGTGGAGATGAAGTCAGAAAACCCATATAATGACTTCAGAGAATCCATGATCCAAATGATCATCGTGAGAGACATACATTCAACAAGTGAGCTTGAAGAGCTTCTCCAATGGTTTCTTAAGCTGAATTTGCCATGTTACCACCAGCTCATCCTCGAGGCTTTCTCCGACATATGTCGACAGCTTTCAACTCCACGTGGCAATCGTGAAGCTCCATGA 501 0.4611 MSKNKRNLLRSVLRANGGCGNCGSSPKSFDVHDPTPKPKISSLPNTNPTILTSLSNVPNEHSGSDGGDQVTCTASSEDQKGSENSMNGKLSGSIVVEMKSENPYNDFRESMIQMIIVRDIHSTSELEELLQWFLKLNLPCYHQLILEAFSDICRQLSTPRGNREAP 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1005 166 ProSiteProfiles OVATE domain profile. 96 155 IPR006458 -
Lele10g1005 166 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 94 157 IPR006458 -
Lele10g1005 166 MobiDBLite consensus disorder prediction 23 89 - -
Lele10g1005 166 MobiDBLite consensus disorder prediction 39 89 - -
Lele10g1005 166 Pfam Transcriptional repressor, ovate 100 156 IPR006458 -
Lele10g1005 166 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 75 157 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1005 Lele-ChrLele10 21510019 21510519 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lele10g1005 Ovate 2.4e-21 No_clan