Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0997 ATGGCCTGCCGGATACTGATCGCCGGGAACTTGGATCCGGAGAGAAAGAGGTGTGGGGGCTTGAGGACTAAACAAGCGGGAAGAGGATCCTTTTTCGTCTTTTTGAATCCCGTCGTTGAAACCATGGGCTTTTTGTTGAAACAAGTTCTCAAGACTCTCTGCAGTCGGAATCAATGGTCTTACGCTGTCTTCTGGAAGATCGGCCGCCATAACCCCAAGCTGTTAAATTGGGAAGATTGCTATTATGAACCCTTGCCATGTCAATTTCCTAGGGGCATCGCTGGAACAGAGACTTCTAGTTTGCCTTTTGTGAGTGGGGAAGGCTTCTGGCGTTCTTCTGATTCTCATTCTTCTCAGATAGGAACCCAAGAAGAGGATAGAGTCTGCGCTTTGATTAACAAAATGATGGCGAATATTTCGGTCAATGTCATGGGTGACGGGATTATTGGGAGGGCTGCATTTACAGGAAACCACCAGTGGATTAATTTGAACAATTTTAGAAGAGAAGCATGTCCGCTGGAGGTGTACAATGAGGTGAATCTCCAGTTTTCAGCTGGAATGCAGACAGTAGCAGTTATTCCTGTGCTTCCCCATGGGGTTGTTCAACTTGGTTCTTTCTTGCCAATAATGGAGAACATGGGATTAGTGAATGAAGTAAAGAGCTTTGCTATGCAATTGGGGTGTGTCCCTGGTGCTCTTTCATCCGAAGACTTTTCAGAAAAAGCTTCTATTGAAAGATTTGGTAATCCTGTTACTGTCGGGATGGCTGTGTCTGTTGATCTGCCAGTAATTACCTCCAATGCCACACCCTCAGTAACTTACGGCTTCAACCAAGAAATCAGGTTGTCTTGTACTTCAAGCCCTATTGTTCAACCAGCTCATCCTCTTAAAGGAGAGATAAATAACCATCCAGGTTCTGTATTGACACATCAAACCCCTAACATTACTCATATATTATCTAATTACCGCGATAAACTTTGTGAACCTTCATCAATACCAATGATGAACTTAAGTTTTGATGTCCAGCCTGAGAATTTACTTGTGGAGGCAGAGGTGATGCCCTTGAATCTTGATTCATGTCTGCCACAATATTCTGCCTCATTGAATGCTAGCTCTGCGTCCAATAAATTTACTGACTTGAGCCAATCCAGTCTGGGTGACTGCAGCATAAAAGTTAAGGAAAAAGAAAATTTGTCTAGCTGTGGGAGTCAAAGTTATCTTAAATCAAATTTGGCTGTATCAAATACATTGTCTCAACTGAAAAATAGTGGAGGCCATGTACTTGATCACAGTCAGATTACTGTTAGTTCTTCATCAATTCATGGTGGAACGAGCAGACTTTTGAGGCCAAATCTCGTCTCCAGCTCTGTTTCTAATCCTTCTAAAGCTGCCACTGCTGATTTTTGTGAAACCAGGAAAGCTAGGCCTGGGCTTCAAAATGATGGTTTAACAAAAGTAGGGTGCTACTCTCCGCCTAACTTGACCAGTCAATCTGGTACTAGTCCCATGCCTCTAGAAGGTTATGATCAGAACAATATTCCTATAGATTTAAAGCATGCTCATGATAAATTGGCTCCAACAGGCCAAAGAATGGATGATGATCTGCTGCAGGCCATTAAGATCCCATCTCTTCATCTTGTGGAGCAGCAGGTGTCTATGAGTGATCACATCCCTACTTGTCTTCTACCTCCATCAAGTGATGACCTATTTGATGTTTTAGGTGTGAATCTTAAAAACAAACTACTGAATGAAAGCTGGAATAAGTTGCTTGCGAAAGAATCAAATGCTGCTGCTGAAATTCTGCAAAACAAGGCAACATTTTTGAGCATGCACGATAGAGATCCTGATGTTTATTTAATTAATGAAGCCATTTCAGACGGTGGTGTCTTCTCTGAGAGGGGCGATGACCATCTCCTGGATGCTGTGGTCTCAAGGGCAAAGTCTATTGGGAAACAGGATTCTGATGATATGTCTTGCTGGACAACATTGACTAGGACTAGTAATGCTTCTGTGCCCTCTCCTGCTTTTAGGAAGGTTATGTCTAATCATACTCAGGGTGGATTCTCTGGTTTTCCTAAAGACGTGAGTAAAGCTGGTGCGGCAGAAACTAGTTCTCTTAGGTCTGGATGTGGCAAGGATGATGCTCGAAGCTGTTCTCATACTACTTCCATTTATGGGTCTCAACTTAGCTCATGGGTTGAGAATGCTACAAATGTGAAACATGAAAATAGTGTCTCAACTGGATTCTCTAAGCGGCCTGATGAAGCCTGCAAGTCAAATCGTAAAAGGCGTAAGCCTGGGGAGAACCCCAGACCTCGACCTAAAGATCGCCAAATGATTCAAGATCGTGTGAAAGAGCTACGGGAAATTGTACCAAATGGAGCAAAATGTAGCATAGATGCACTTCTTGAACGAACAATCAAGCACATGCTTTTCTTGCAAAGTGTGACAACGCATGCTGACAAGCTAAAACAAACAGGGGAATCTAAGATTATGAGTAAGGAAGGTGGCCTGCTTTTAAAAGACAATTTTGAGGGAGGGGCCACTTGGGCATATGAGATTGGCTCACAATCAATGGTTTGCCCCATCATAGTAGAGGATCTGAATCCCCCTCGTCAGATGTTAGTGGAGATGCTGTGTGAAGAACGAGGTTTCTTTTTGGAAATAGCTGACTTAATCAGAGGATTGGGGTTGACCATATTGAAGGGGTTGATGGAAACCCGAAATGACAAGATCTGGGCATGCTTTGCTGTAGAGGCAAATCGCGACATAACAAGGATGGAGATATTCATGTCTCTGGTTCATCTTTTGGAGCAAACAGGGAAGGGAACTGCATCTTCATCCAACCCTATATATCAGTCCTTCCCTCAAGCCACCCAGATAGACGCAACGGGCGGACCTAGTAGTTTGCAATGA 2916 0.4342 MACRILIAGNLDPERKRCGGLRTKQAGRGSFFVFLNPVVETMGFLLKQVLKTLCSRNQWSYAVFWKIGRHNPKLLNWEDCYYEPLPCQFPRGIAGTETSSLPFVSGEGFWRSSDSHSSQIGTQEEDRVCALINKMMANISVNVMGDGIIGRAAFTGNHQWINLNNFRREACPLEVYNEVNLQFSAGMQTVAVIPVLPHGVVQLGSFLPIMENMGLVNEVKSFAMQLGCVPGALSSEDFSEKASIERFGNPVTVGMAVSVDLPVITSNATPSVTYGFNQEIRLSCTSSPIVQPAHPLKGEINNHPGSVLTHQTPNITHILSNYRDKLCEPSSIPMMNLSFDVQPENLLVEAEVMPLNLDSCLPQYSASLNASSASNKFTDLSQSSLGDCSIKVKEKENLSSCGSQSYLKSNLAVSNTLSQLKNSGGHVLDHSQITVSSSSIHGGTSRLLRPNLVSSSVSNPSKAATADFCETRKARPGLQNDGLTKVGCYSPPNLTSQSGTSPMPLEGYDQNNIPIDLKHAHDKLAPTGQRMDDDLLQAIKIPSLHLVEQQVSMSDHIPTCLLPPSSDDLFDVLGVNLKNKLLNESWNKLLAKESNAAAEILQNKATFLSMHDRDPDVYLINEAISDGGVFSERGDDHLLDAVVSRAKSIGKQDSDDMSCWTTLTRTSNASVPSPAFRKVMSNHTQGGFSGFPKDVSKAGAAETSSLRSGCGKDDARSCSHTTSIYGSQLSSWVENATNVKHENSVSTGFSKRPDEACKSNRKRRKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTTHADKLKQTGESKIMSKEGGLLLKDNFEGGATWAYEIGSQSMVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGLMETRNDKIWACFAVEANRDITRMEIFMSLVHLLEQTGKGTASSSNPIYQSFPQATQIDATGGPSSLQ 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0997 971 CDD bHLH_AtLHW_like 768 837 - -
Lele10g0997 971 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 46 221 IPR025610 -
Lele10g0997 971 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 764 813 IPR011598 GO:0046983
Lele10g0997 971 MobiDBLite consensus disorder prediction 754 779 - -
Lele10g0997 971 MobiDBLite consensus disorder prediction 741 779 - -
Lele10g0997 971 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 42 961 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0997 Lele-ChrLele10 21439688 21444873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0997 566 968 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 54.034 5.20e-116 369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0997 10 21439688 21444873 Lele11g1046 11 17746112 17751099 hybridization
Lele10g0997 10 21439688 21444873 Lele12g0277 12 2373484 2378430 hybridization