Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0993 ATGCCTCCCTTTCAAGGCCTCAATTGCACTCCCCGACTTGGACAAGTGGATAATTTCACAATTGCAGATAATTCACGTCGGCTCATGAGAGATCCCGTCACGGTCTTCACTGGAATCACTTACGATAGAGAAAACATTGAAACATGGCTGTTTTCGTGCAAGAACAGAACGTGCCCTGTGACAAAGCAATCGATTTTAGATACAGATCTCACCCCAAACCACACGCTTCGAAGTCTGATCCAAGCTTGTAGCGATGCCGGAGTCAACCACGACGACGACGACGACGACGATGAATGCACTTCCGTTATGGGTAGTGAAGCAGCACTTGAGGTTCTGTACCATCTGAATCCTTCAGAAACTCACGTTAAAATTATAGTGAGCAATGAGGGGATTAAATTCATCGATTCCTTGATCCAAATCCTGAGGACTGGGAACTACCAATCTCGAGCGTATGCAATAATATTACTAAAATCAGCGTTCGGAGTTGCAGATCCAAGCCAACTGATCAACGTGAGAACAGAACTGTTCGTGGAACTCATGAGAGTGTTACGAGATAAGATTTCACGGCAAGCTTCAAAGGCAGCGTTGAAGCTGGTGGTGGAGTTGTGTCCATGGGGGAAGAACAGAATCAAAGCGGTGGAAGGCGACGTGGCTTTGGTGTTGATCGAGATGCTTCTAGAAGCATCGGAGAGAAGAGCTTGTGAATTGATTCTGATAGCGTTGGATCAGCTGTGTGGGTGTGCAGAAGGAAGAGCGGAGTTGGTGAAGCACGGCGCCGGAGTGGCGATCGTGTCGAAAAAGATTCTGAGGGTATCACACGTGGCAACAGATAGAGGGGTAAAGATATTGAGGTCAATTTGTAGGTATTCGGGGAATGCGAAGGTGGTTCAGGAAATGTTGCAGGTTGGTGCAGTGTGTAAGCTGTGTTTGGTGCTGCAAGTGGAAGCGAGCTTGAAGACGAAGGAGAGGGCAAAGGAGGTTCTGAAATTGCACTCCAACATTTGGAGGAATTGCACCTGTATCCCTCCGTCTTTGCTCCAATCCTATCCTTAA 1053 0.4748 MPPFQGLNCTPRLGQVDNFTIADNSRRLMRDPVTVFTGITYDRENIETWLFSCKNRTCPVTKQSILDTDLTPNHTLRSLIQACSDAGVNHDDDDDDDECTSVMGSEAALEVLYHLNPSETHVKIIVSNEGIKFIDSLIQILRTGNYQSRAYAIILLKSAFGVADPSQLINVRTELFVELMRVLRDKISRQASKAALKLVVELCPWGKNRIKAVEGDVALVLIEMLLEASERRACELILIALDQLCGCAEGRAELVKHGAGVAIVSKKILRVSHVATDRGVKILRSICRYSGNAKVVQEMLQVGAVCKLCLVLQVEASLKTKERAKEVLKLHSNIWRNCTCIPPSLLQSYP 350
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0993 350 SMART Ubox_2 25 83 IPR003613 GO:0004842|GO:0016567
Lele10g0993 350 SUPERFAMILY ARM repeat 107 329 IPR016024 -
Lele10g0993 350 ProSiteProfiles U-box domain profile. 28 90 IPR003613 GO:0004842|GO:0016567
Lele10g0993 350 Pfam U-box domain 26 82 IPR003613 GO:0004842|GO:0016567
Lele10g0993 350 Gene3D - 104 333 IPR011989 -
Lele10g0993 350 SUPERFAMILY RING/U-box 26 82 - -
Lele10g0993 350 PANTHER WDSAM1 PROTEIN 26 85 IPR045185 GO:0061630
Lele10g0993 350 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 95 IPR013083 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele10g0993 Lele-ChrLele10 21350034 21352015 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0993 15 350 U-box Gene Family AT2G35930 40.750 1.03e-101 304