Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0991 ATGGGAGAGACAAACCCTACCACCGATGAGGACTTGCTTCTCAGGAACTTCTTCGCCGAAGTCAGCGAAGTTGAGCGGGACAACGAAGTCGCTAGGATTCTCTCTTGTTTTAAGCTGAACCCATTTGAGCATCTAAACCTTCCATTTGATTCTTCACTTGATGATGTCAAAAAGCAGTACCGCAAGTTGTCATTGATGGTTCACCCTGATAAATGCAAGCATCCACAAGCAAAGGAAGCCTTTGGAGCATTAGCGAAAGCTCAGCAGTTGTTACTTGATCAAAATGAAAGAGATTACATTCTCAGCCAAGTTGATTCAGCAAAAGAGGAGCTTAGAGCAAAGAGGAAGAAGCAATTGAAGAAAGATACTGCTTCAAAAATCAAGTCTTTGGTAGAAGAGGGAAAATATGATCAACAATACGAACGGCCTGAGGAATTCCAGCAGGAGCTTAGAATCAAGGTCCGTGAGCTATTAACAGAACAAGAATGGAGGAGAAGAAAAATGCAAATGAGGATATCAGAGGAGGAAGGCAGACTAAAACGGGAAGAAGAGGAACAGAAGGAGATGTGGAAAAGAAAACGTGAACATGAGGAGCAGTGGGAAGGAACGAGGGAACAGAGGGTATCCAGTTGGAGAGATTTTATGAAGGCCGGAAAGAAGGGTAAGAAAGGAGAGATTCGCCCTCCAAAGCTCAAGACCGAAGATCCCAATAAATCCTACGTACAGAGGCCTGTGAAGCGAGGTTAG 747 0.4418 MGETNPTTDEDLLLRNFFAEVSEVERDNEVARILSCFKLNPFEHLNLPFDSSLDDVKKQYRKLSLMVHPDKCKHPQAKEAFGALAKAQQLLLDQNERDYILSQVDSAKEELRAKRKKQLKKDTASKIKSLVEEGKYDQQYERPEEFQQELRIKVRELLTEQEWRRRKMQMRISEEEGRLKREEEEQKEMWKRKREHEEQWEGTREQRVSSWRDFMKAGKKGKKGEIRPPKLKTEDPNKSYVQRPVKRG 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0991 248 CDD DnaJ 40 93 IPR001623 -
Lele10g0991 248 PRINTS DnaJ domain signature 42 60 IPR001623 -
Lele10g0991 248 PRINTS DnaJ domain signature 76 96 IPR001623 -
Lele10g0991 248 PRINTS DnaJ domain signature 60 75 IPR001623 -
Lele10g0991 248 Pfam DnaJ domain 41 97 IPR001623 -
Lele10g0991 248 SUPERFAMILY Chaperone J-domain 37 98 IPR036869 -
Lele10g0991 248 SMART dnaj_3 39 96 IPR001623 -
Lele10g0991 248 PANTHER J DOMAIN-CONTAINING PROTEIN SPF31 5 248 - -
Lele10g0991 248 Gene3D DnaJ domain 19 100 IPR036869 -
Lele10g0991 248 MobiDBLite consensus disorder prediction 174 248 - -
Lele10g0991 248 Coils Coil 165 199 - -
Lele10g0991 248 MobiDBLite consensus disorder prediction 174 242 - -
Lele10g0991 248 ProSiteProfiles dnaJ domain profile. 40 96 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0991 Lele-ChrLele10 21275510 21279173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0991 19 99 Miscellaneous Gene Families AT1G16680 40.230 2.26e-06 46.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0991 10 21275510 21279173 Lele29g0404 29 2443016 2448690 CCT
Lele10g0991 10 21275510 21279173 Lele30g1006 30 13526029 13531348 CCT
Lele10g0991 10 21275510 21279173 Lele31g1139 31 18036311 18041910 CCT
Lele10g0991 10 21275510 21279173 Lele32g0385 32 2386235 2391359 CCT
Lele10g0991 10 21275510 21279173 Lele11g1040 11 17592610 17595727 hybridization
Lele10g0991 10 21275510 21279173 Lele12g0284 12 2547020 2550255 hybridization