Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0989 ATGGATGTCGATTCCTCGATGTCACCAGAAAGCGATAACGATCGTGCCGTGCAAAATCATACTGCTAGTCAGGCTCCGGCAACTATGGATAGAGAGCAGCCAGGAGAGGAGCCGTCATCCGGAGGCGCGTCTCAGGCACAGTCGCCAGCGCAGCAGCAACAACAACAGCAGGCTGCTGCTCAGGTGCAGCAGAATCCTGTTGTTGGACCTAGGCTGGCGCCAACTTACACTGTCGTGAATGCAATTTTAGAAAAGGAGGAGGATGGGCCAGGGCCGAGGTGCGGCCACACTTTGACGGCGGTGGCAGCTGTTGGAGAGGATGGTACACCTGGATACATTGGTCCGAGGCTGATTTTGTTTGGTGGTGCCACCGCACTTGAAGGGAATTCTGCGGCTGCTGGGACTCCTTCATCCGCCGGGAATGCTGGCATACGTTTAGCTGGTGCCACGGCTGATGTACACTGCTATGATGTGTTGACTAATAAATGGTCTAGGATAACTCCCTATGGAGAACCTCCAACCCCAAGGGCTGCACATGTGGCAACTGCTGTAGGAACAATGGTAGTTATTCAGGGTGGCATTGGTCCTGCTGGTTTGTCAGCAGAGGACCTTCATGTTCTTGATCTCACTCAGCAACGGCCACGATGGCACAGAGTCGTTGTTCAAGGCCCTGGACCAGGGCCACGTTATGGACATGTGATGGCTTTGGTGGGGCAGAGGTATCTTATGGCAATTGGAGGAAATGATGGAAAAAGACCTTTAGCTGATGTATGGGCCTTGGACACAGCTGCTAAGCCTTACGAATGGCATAAGTTGGAGCCAGAAGGAGAAGGCCCACCACCATGCATGTATGCAACTGCTAGTGCACGCTCTGATGGGCTTCTTCTGCTTTGTGGAGGAAGGGACACCAATAGTGTGCCACTGGCTAGTGCATATGGACTTGCGAAGCATAGGGATGGTCGATGGGAATGGGCAATTGCCCCTGGTGTTTCACCATCTCCAAGATATCAGCATGCAGCAGTATTTGTTAATGCAAGGCTCCATGTGTCTGGAGGAGCGCTTGGTGGAGGGCGTATGGTAGAAGACTCATCCAGTGTTGCAGTGTTGGATACTGCTGCTGGTGTTTGGTGTGATACCAAATCTGTTGTCACCAGTCCAAGGACTGGTAGATACAGTGCTGATGCAGCTGGTGGAGATGCCTCAGTTGAATTGACAAGGCGTTGTAGGCATGCAGCTGCTGCCATTGGTGACCTTATATTTATTTATGGCGGTTTACGTGGCGGAGTATTGATCGATGACCTACTTGTTGCTGAAGATCTTGCTGCTGCTGAAACAACAAATGCTGCTTCGCATGCTGCTGCTGCAGCAGCAGCTGCATATAATGTACAAGCAGGACGATTACCTGGGCGATATGGATTTGTTGACGATAGGAACAGGCAAACAATGTCTGAAGCAACTGCTGATGGTTCAGTTGTTCTGGGAAATCCTGTGGCTCCCCCTATAAATGGTGACATGTATACTGACATCAGCACTGAGAATGCCATGCTCCAGGGAACCCGGAGGACTAACAAAGGTGTCGAGTATCTTGTTGAAGCATCAGCTGCAGAAGCTGAAGCTATAAGTGCCACTTTAGCTGCTGCTAAAGCACGTCAGGAGAATGGAGAAGTTGAATTACCTGACAGAGACCGTGGGGCCGAGGCTACCCCTAGTGGGAAACCAAAATCTTCTCTGATTAGGCCTGATTCAGCAGGCCCAAATGATATTGTTCCTGGTGGAGTTCGGCTGCATCATAGAGCTGTTGTCATAGCTGCAGAGACTGGTGGAGCATTAGGTGGTATGGTTAGACAGCTTTCAATTGATCAGTTTGAAAATGAAGGCAGGCGAGTCAGTTATGGAACTCCAGAAAGTGCAACTGCAGCTAGAAAATTATTAGATCGGCAGATGTCAATCAATAGTGTCCCAAAGAAGGTCATAGCTCACCTATTAAAACCTCGAGGCTGGAAGCCACCAGTTCGCCGGCAGTTTTATTTAGATTGCAATGAAATTGCAGATCTTTGTGATAGTGCAGAGCGGATATTTTCAAGTGAACCCACTGTTTTACAACTTAAGGCACCAATTAAAATATTTGGTGATTTACATGGGCAATTTGGGGATCTCATGCGTCTCTTTGATGAATATGGTGCACCATCAACTGCTGGTGACATAGCATATATCGATTATCTATTCCTAGGAGATTATGTTGACCGGGGTCAACACAGCCTGGAAACTATAGCCCTTCTACTTGCTCTGAAGGTTGAATATCCCAACAATGTACACTTGATACGTGGAAATCATGAAGCTGCAGATATTAATGCCCTTTTTGGTTTCCGAATTGAGTGCATTGAGAGGATGGGTGAGAGAGATGGAATATGGACATGGCATCGGATTAATCGTTTGTTTAATTGGCTTCCCCTGGCCGCCCTAATTGAGAAAAAGATTATTTGCATGCATGGTGGTATTGGTCGTTCAATAAATCACGTGGAACAGATTGAGAATCTTCAGCGTCCAATTACAATGGAAGCAGGGTCAATTGTGCTGATGGATCTATTATGGTCTGATCCTACAGAGAATGACAGTGTAGAAGGACTGCGGCCAAATGCTAGGGGTCCAGGGTTAGTTACTTTTGGGCCTGACCGTGTCATGGAATTCTGCAACAACAATGATCTTCAGTTGATTGTTCGTGCTCATGAATGTGTGATGGATGGCTTCGAGCGTTTTGCTCAGGGACATTTGATCACTCTATTCTCAGCTACAAATTACTGTGGTACTGCAAATAATGCTGGGGCGATATTAGTCTTGGGCAGAGATCTTGTTGTGGTTCCTAAATTGATTCATCCATTACCACCTGCACTTTCCCCGGAAGCATCACCAGAACGTCATATTGAAGATACATGGATGCAGGAGTTGAATGCTAATAGACCGCCGACTCCAACTAGAGGTCGTCCTCCAGTTGCTACTGATCGAGGTTCACTTGCTTGGATATAA 3024 0.4795 MDVDSSMSPESDNDRAVQNHTASQAPATMDREQPGEEPSSGGASQAQSPAQQQQQQQAAAQVQQNPVVGPRLAPTYTVVNAILEKEEDGPGPRCGHTLTAVAAVGEDGTPGYIGPRLILFGGATALEGNSAAAGTPSSAGNAGIRLAGATADVHCYDVLTNKWSRITPYGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWHKLEPEGEGPPPCMYATASARSDGLLLLCGGRDTNSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCRHAAAAIGDLIFIYGGLRGGVLIDDLLVAEDLAAAETTNAASHAAAAAAAAYNVQAGRLPGRYGFVDDRNRQTMSEATADGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRTNKGVEYLVEASAAEAEAISATLAAAKARQENGEVELPDRDRGAEATPSGKPKSSLIRPDSAGPNDIVPGGVRLHHRAVVIAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFYLDCNEIADLCDSAERIFSSEPTVLQLKAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETIALLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWTWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPALSPEASPERHIEDTWMQELNANRPPTPTRGRPPVATDRGSLAWI 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0989 1007 Pfam Kelch motif 334 380 IPR011498 GO:0005515
Lele10g0989 1007 Gene3D - 200 459 IPR015915 GO:0005515
Lele10g0989 1007 MobiDBLite consensus disorder prediction 553 568 - -
Lele10g0989 1007 PRINTS Serine/threonine phosphatase family signature 841 868 IPR006186 GO:0016787
Lele10g0989 1007 PRINTS Serine/threonine phosphatase family signature 923 939 IPR006186 GO:0016787
Lele10g0989 1007 PRINTS Serine/threonine phosphatase family signature 740 767 IPR006186 GO:0016787
Lele10g0989 1007 PRINTS Serine/threonine phosphatase family signature 901 921 IPR006186 GO:0016787
Lele10g0989 1007 PRINTS Serine/threonine phosphatase family signature 773 797 IPR006186 GO:0016787
Lele10g0989 1007 PRINTS Serine/threonine phosphatase family signature 811 837 IPR006186 GO:0016787
Lele10g0989 1007 PRINTS Serine/threonine phosphatase family signature 705 732 IPR006186 GO:0016787
Lele10g0989 1007 MobiDBLite consensus disorder prediction 1 28 - -
Lele10g0989 1007 Pfam Calcineurin-like phosphoesterase 705 912 IPR004843 GO:0016787
Lele10g0989 1007 MobiDBLite consensus disorder prediction 1 64 - -
Lele10g0989 1007 MobiDBLite consensus disorder prediction 551 590 - -
Lele10g0989 1007 FunFam Serine/threonine-protein phosphatase 641 980 - -
Lele10g0989 1007 Gene3D - 73 199 IPR015915 GO:0005515
Lele10g0989 1007 FunFam Serine/threonine-protein phosphatase 273 474 - -
Lele10g0989 1007 FunFam Serine/threonine-protein phosphatase 72 269 - -
Lele10g0989 1007 SUPERFAMILY Kelch motif 147 437 IPR015915 GO:0005515
Lele10g0989 1007 CDD MPP_Bsu1_C 657 959 IPR041758 -
Lele10g0989 1007 SUPERFAMILY Metallo-dependent phosphatases 662 962 IPR029052 -
Lele10g0989 1007 MobiDBLite consensus disorder prediction 38 64 - -
Lele10g0989 1007 ProSitePatterns Serine/threonine specific protein phosphatases signature. 774 779 IPR006186 GO:0016787
Lele10g0989 1007 Gene3D - 640 980 IPR029052 -
Lele10g0989 1007 MobiDBLite consensus disorder prediction 983 1007 - -
Lele10g0989 1007 SMART pp2a_7 677 961 IPR006186 GO:0016787
Lele10g0989 1007 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 1007 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0989 Lele-ChrLele10 21258600 21274098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0989 669 904 Calmodulin-binding Proteins AT5G63870 29.044 5.22e-26 107
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0989 10 21258600 21274098 Lele29g0406 29 2472671 2475994 CCT
Lele10g0989 10 21258600 21274098 Lele30g1005 30 13494812 13499343 CCT
Lele10g0989 10 21258600 21274098 Lele31g1138 31 18009092 18012393 CCT
Lele10g0989 10 21258600 21274098 Lele32g0387 32 2420167 2423686 CCT
Lele31g1147 31 18094050 18094715 Lele10g0989 10 21258600 21274098 CCT
Lele32g0374 32 2328510 2329175 Lele10g0989 10 21258600 21274098 CCT
Lele10g0989 10 21258600 21274098 Lele11g1039 11 17576480 17591225 hybridization